Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0459 ATGGGTTTCGCGTTTAATGGAGGTTTAATGGAGGTCACAACAGAGAGGTTGGAGACAAGGGATGGAACCCCACTCTCAGGAGGTCAAAAGCAGAGAATTGGATTGGCTCGAGCCATGACGAAAAATCCTAAAATCCTTCTCTTACATGAACCCAAAAGGCCATTGACCATTGTCAATGCTCACAGGATAGCAACATTCGCCATGGCTAATTCTTCCATGGATATTGTGTCGTCCTACTCCTCCATCTCAGCTCCCAATTCACGTCGCTACTACCCATCTCCCACAAACTCTTGCAACGGCTCTTTCTCCTTCACAGCCTCCACCTCTCACACCGACGTAAGAGCTCCTCCCGCCTCACCGTTTGATTCAGATCATGAACATTCTTGGGGAGAAGAAATTTCATGGCAGATTGAGCTCAATGAGAGACTCAACTACCCTAAAACCCTCGGCTCTGCTCTGAGTCCATGGGGTTGGAGCCCCCCATCACCTTCAAGTCTCAGCCAGACATTTCGTCGAACACCTAACGACCACCACTTCCCTCGAACACACGAAAATGGGAAAGTCGAGCTTCGGAGCTACGCTACAAGTGAAAATGAAATGGGTTATAACAGTGAGAGGATAAATCTTGAAGGGTATTACAGTGAGAGTGAAGATGAGAAGGAGAAGGCTTCAGGAAGAAGAAGAGTGGGGTTGATGGGGTTGTTTAGGTACTCAACAAAGTGGGATATGGTGGTAGTGATGGTGGGGTGTGTTGGGGCGATCATTAATGGCGGATCACTGCCTTGCTATTCGTATCTGTTTGGTGAGTTGGTCACTAAGATTGCTTCTGAAGCATTCGCCGGCAACAAAAGCCAGATGCTCAGGGACGTCCAACAGGTGTGCATATATATGGTCGGGTTAGCTGCAGTGGTGCTAGTAGGAGCATATATAGAGATCACATGTTGGAGGTTGGTAGGGGAAAGTTCTGCTCAGAGAATAAGAAGAGAGTACTTGAAAGCAATTCTTAGGCAAAACATTGCCGTTTTTGATACAGAGCTGAGCACTGGTGATATCATGCATGGAATTGCAAGTGATGTTGCTCAGATTCAAGAAGTCATGGGAGAGAAGATGGCTCATTTCATTCATCATGTATTTACATTCATTTGTGGGTACACAGTTGGGTTTCTAAGGTCATGGAAGGTCTCTCTGGTGGTTTTATCAGTTACCCCTCTCACTCTTTTCTCTGGCATAGCCTACAAAGCTGTTTATGGAGGTCTAACAGCAAAAGAGGAAGCTTCATATAGGGAAGCAGGAAGCATAGCAGAGCAGACCATAAGATCAATAAGGACAGTGTTTGCTTTTGTTGCAGAAAGCCAAATGGGTTCAAAATACAGAGAAGTACTGCAAAAATCAGAGGCATTTGGGGCAAAGATAGGGTTTGCAAAAGGTGGAGGCATGGGATTAATCTATTTAATAACCTACTCAACATGGGCATTGGCTTTCTGGTATGGCTCCCTCTTAATTTCCAGAAATGAGATTGATGGAGGTGCAGCCATTTCTTGTTTCTTTGGCGTTAATATTGGAGGAAGAGGCTTGGCACTGGCACTTTCATATTTTGCACAATTTGCACAAGGCACCGTTGCAGCAAGTCATGTATTTGAAATGATAGAGAGAATTCCTGAGATTGATCCATACAGCTCTGAAGGAAAGAAGCTTGCCAATGTTAATGGAATAATTGAGTTCAAGAATGTCAGCTTTGCATACCCATCTCGTCCTGATGCTCTCATTCTTCAGTCCCTTAACTTAGTCATTTCTTCTGCAAGAACCATAGCCTTGGTTGGCCCTAGTGGAGGAGGCAAGTCTACCATCTTTGCTCTCATAGAGAGGTTTTATGATCCCATCGAAGGGGTAATAACCTTGGATGGTCATGATTTGAGAAGCTTTCAAGTCAAATGGCTAAGGGATCAAATTGGAATGGTGGCTCAGGAGCCAATTCTTTTTGCCACAACCATACTTGAGAATGTCATGATGGGGAGAGAGAATTCCACCAAGGAAGACGCAGTTAATGCTTGCATTGCTGCTGATGCCCACAGCTTTATCTCTAGCCTACCACTAGGCTATGACACTGAGGTTGGGGATAGGGGAACCCAACTCTCAGGTGGTCAAAAACAGCGAATTGCACTGGCTCGAGCCATGATTAAAAATCCTAAACTACTTCTCTTAGATGAACCTACCAGCGCGCTTGATGCTGAGTCAGAGTCTACAGTCCAAAAAGCCATTGACAAGATTTCTGCTGGCCGGACCACCATTGTCATTGCTCACAGGATAGCAACAGTAAGGAATGCTCACACCATTGTAGTTCTTGAATGTGGTTCTGTGACTGAGATTGGTGATCATCACCAACTTATGAGGAAAGCTGGCACATACTATAATCTCATCAAGCTTGTTTCTGAAGAATCTGATCCCATCTCAAAACCTAGGCCTGAAAATGTCACACAAAAGGCTAATGACTTTTCTGTCTCTGAGAAATCATTTTCTGATATCTCAGGGTTCACTTCGAAGTACTCAATATCCATGCATGAAGAAGAGCTAGAAGATATGGATCATGTAAAAAAGAAAAAGCCAAGAAAGTTCAAACTCTATGAGATATGGAAACTGCAAAAGCCAGAGCTTGTGATGCTATTGTTGGGATTCCTTCTGGGTATGTTTGCAGGTGCTTTCTTGTCCCTTTTCCCCTTGATTTTAGGCATGGCCCTTGAAGAATATTTTCATGACGACACTTCAAAGATGACAGGAGATGTTGGTCACCTTTGTCTAGCACTTGTTGGTCTTGGTTTCGGATGCATCATCTCCATGACAGGACAACAAGGCCTGTGTGGCTGGGCTGGAACAAAACTCACATTAAGGGTTAGAGACTTTCTGTTTCAAGCCGTACTAAAACAAGAACCAGGATGGTTTGATTTTGAAGAAAACTCCACCGGCGTATTAGTTTCAAGGCTGTCCATTGATTGTGTTAGCTTTCGTTCAGTTCTTGGTGATAGACTTTCTGTCCTTTTAATGGGGTTAAGTTCAGCTGCCGTAGGGTTTGGTGTATCGTTTTCCCTTGAATGGAGATTAGCCCTTTTGGCTGCTGCTTTGGCCCCATTTACTCTTGGTGCTAGCTACTTAAGTTTGATCATAAACATAGGGCCAAGAGTTGAAAACAATTCTTATGCCAGAGCTAGTAATATTGCTTCTGGTGCAGTTTCAAACATAAGGACAGTCACAACTTTATCTGCCCAAGAACAAATAGTAAAGTCCTTTGATCAAGCCTTGTTAGAACCTAGGAGAAAATCTGTAAAGAAGTCACAAATTCTAGGCCTAACACTTGGGATTTTTCAAGGAGCCATGTATGGGGCATACACATTAATTCTTTGGTTTGGCGCCTACCTTGTGAAACAGAACAAAACAGAATTTGGAGATGTTTATAAGATCTTTCTCATTCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCAGGCTTAGCACCAGATACTTCCATGGCAGCTACAGCAATTCCTGCAGTTCTAGATATCATAGACCGGAGGCCATTGATTGACGATGATAGAACAAAGGGTAGGAAGATAGAAAGATCAAGGTCAAAGTCATTGGAAATAAAGTTCAATAAGGTGACATTTTGTTACCCATCTAGGCCTCAAGTGTTTGTGTTGAAGGATTTCAGTTTGAAGGTGAGAGCAGGAAGCACAGTGGCTTTAGTGGGGCCAAGTGGGTCAGGAAAATCAACAGTGATATGGATGATACAGAGATTCTATGATCCAAATGAAGGGAAAGTGATGATTGATGGGTTGGATTTGAGAGAGATTGATGTGAAATGGTTGAGGAGACGAATGGCTTTGGTTAGTCAAGAGCCTGCACTTTTTGCTGGGAGCATTAGGGACAATATTGCCTTTGGGGATGTAAATGCCACGTTCACAGAAATTGAAGAGGCTGCAAGGAAAGCTCAAGTTCACAATTTCATAAGTGGCCTTCCTCAAGGTTATGAAACCCAGGTGGGTGAGAGTGGGGTCCAGTTATCAGGAGGGCAAAAGCAAATGATAGCAATAGCAAGAGCCATATTGAAGAGATCAAGGGTGTTATTGTTTGATGAAGCAAGCAGTGCCTTGGACTTAGAGTCAGAGAAACTTATTCAAATTGCTCTAAGAAGTGTGGCAAAAGAAGCAACCACCATAGTGGTGGCCCATCGTCTATCTACAATCAGAGAAGCTCAAATGATTGCAGTTATGGAAGATGGTACTGTGGTGGAGTCTGGTAGCCATGAAACTCTCATGGCTTCCCATGGTGATGGTTTGTATGCTAGCTTTGTTCGTGCTCAGACTCAGTCCAATGCCTTTTCTGATTCATAG 4383 0.4365 MGFAFNGGLMEVTTERLETRDGTPLSGGQKQRIGLARAMTKNPKILLLHEPKRPLTIVNAHRIATFAMANSSMDIVSSYSSISAPNSRRYYPSPTNSCNGSFSFTASTSHTDVRAPPASPFDSDHEHSWGEEISWQIELNERLNYPKTLGSALSPWGWSPPSPSSLSQTFRRTPNDHHFPRTHENGKVELRSYATSENEMGYNSERINLEGYYSESEDEKEKASGRRRVGLMGLFRYSTKWDMVVVMVGCVGAIINGGSLPCYSYLFGELVTKIASEAFAGNKSQMLRDVQQVCIYMVGLAAVVLVGAYIEITCWRLVGESSAQRIRREYLKAILRQNIAVFDTELSTGDIMHGIASDVAQIQEVMGEKMAHFIHHVFTFICGYTVGFLRSWKVSLVVLSVTPLTLFSGIAYKAVYGGLTAKEEASYREAGSIAEQTIRSIRTVFAFVAESQMGSKYREVLQKSEAFGAKIGFAKGGGMGLIYLITYSTWALAFWYGSLLISRNEIDGGAAISCFFGVNIGGRGLALALSYFAQFAQGTVAASHVFEMIERIPEIDPYSSEGKKLANVNGIIEFKNVSFAYPSRPDALILQSLNLVISSARTIALVGPSGGGKSTIFALIERFYDPIEGVITLDGHDLRSFQVKWLRDQIGMVAQEPILFATTILENVMMGRENSTKEDAVNACIAADAHSFISSLPLGYDTEVGDRGTQLSGGQKQRIALARAMIKNPKLLLLDEPTSALDAESESTVQKAIDKISAGRTTIVIAHRIATVRNAHTIVVLECGSVTEIGDHHQLMRKAGTYYNLIKLVSEESDPISKPRPENVTQKANDFSVSEKSFSDISGFTSKYSISMHEEELEDMDHVKKKKPRKFKLYEIWKLQKPELVMLLLGFLLGMFAGAFLSLFPLILGMALEEYFHDDTSKMTGDVGHLCLALVGLGFGCIISMTGQQGLCGWAGTKLTLRVRDFLFQAVLKQEPGWFDFEENSTGVLVSRLSIDCVSFRSVLGDRLSVLLMGLSSAAVGFGVSFSLEWRLALLAAALAPFTLGASYLSLIINIGPRVENNSYARASNIASGAVSNIRTVTTLSAQEQIVKSFDQALLEPRRKSVKKSQILGLTLGIFQGAMYGAYTLILWFGAYLVKQNKTEFGDVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLDIIDRRPLIDDDRTKGRKIERSRSKSLEIKFNKVTFCYPSRPQVFVLKDFSLKVRAGSTVALVGPSGSGKSTVIWMIQRFYDPNEGKVMIDGLDLREIDVKWLRRRMALVSQEPALFAGSIRDNIAFGDVNATFTEIEEAARKAQVHNFISGLPQGYETQVGESGVQLSGGQKQMIAIARAILKRSRVLLFDEASSALDLESEKLIQIALRSVAKEATTIVVAHRLSTIREAQMIAVMEDGTVVESGSHETLMASHGDGLYASFVRAQTQSNAFSDS 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0459 1460 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 572 808 IPR003439 GO:0005524
Alju11g0459 1460 CDD ABC_MTABC3_MDL1_MDL2 1212 1451 - -
Alju11g0459 1460 PANTHER ABC TRANSPORTER B FAMILY 216 808 IPR039421 -
Alju11g0459 1460 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1212 1448 IPR003439 GO:0005524
Alju11g0459 1460 FunFam ABC transporter B family member 1 1202 1452 - -
Alju11g0459 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 64 IPR027417 -
Alju11g0459 1460 ProSitePatterns ABC transporters family signature. 711 725 IPR017871 GO:0005524|GO:0016887
Alju11g0459 1460 Gene3D ABC transporter type 1, transmembrane domain 233 1178 IPR036640 GO:0005524|GO:0016020
Alju11g0459 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1209 1451 IPR027417 -
Alju11g0459 1460 SUPERFAMILY ABC transporter transmembrane region 234 556 IPR036640 GO:0005524|GO:0016020
Alju11g0459 1460 Gene3D - 1203 1458 IPR027417 -
Alju11g0459 1460 Pfam ABC transporter 12 51 IPR003439 GO:0005524
Alju11g0459 1460 Gene3D - 7 76 IPR027417 -
Alju11g0459 1460 Pfam ABC transporter 590 739 IPR003439 GO:0005524
Alju11g0459 1460 Pfam ABC transporter 1230 1378 IPR003439 GO:0005524
Alju11g0459 1460 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 248 537 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju11g0459 1460 SUPERFAMILY ABC transporter transmembrane region 876 1193 IPR036640 GO:0005524|GO:0016020
Alju11g0459 1460 FunFam ABC transporter B family member 4 562 814 - -
Alju11g0459 1460 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 888 1174 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju11g0459 1460 Pfam ABC transporter transmembrane region 887 1158 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju11g0459 1460 Pfam ABC transporter transmembrane region 247 520 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju11g0459 1460 Gene3D - 562 810 IPR027417 -
Alju11g0459 1460 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1061 1201 - -
Alju11g0459 1460 CDD ABC_6TM_Pgp_ABCB1_D2_like 877 1192 - -
Alju11g0459 1460 CDD ABC_6TM_Pgp_ABCB1_D1_like 253 545 - -
Alju11g0459 1460 CDD ABC_MTABC3_MDL1_MDL2 572 808 - -
Alju11g0459 1460 SMART AAA_5 1239 1432 IPR003593 GO:0016887
Alju11g0459 1460 SMART AAA_5 599 783 IPR003593 GO:0016887
Alju11g0459 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 563 807 IPR027417 -
Alju11g0459 1460 ProSitePatterns ABC transporters family signature. 1351 1365 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0459 Alju-ChrAlju11 4827019 4839518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0459 22 808 Calmodulin-binding Proteins AT2G36910 32.290 7.13e-119 402