Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0423 ATGTCATCATCTTCTTCTCCGTCCTTATATATAAAATGCAACCAATCCCAAAAGTATTGCAATCCAAAACCAGAAGAAAATAATTTCATAATGGCGATGCATTCTGTGAACTCCTTCAACCGTTACGGTAATCTAGATGAAGCCGAGAATCAACTCTTTCGTCAGAAGACACGTAAGCGCATGATCATCCTCATCCTCTCTTCCATAGTTCTCGGCGTCGTGGTCGTCGCCGGAACCTTCATCCACACGAATCACACCGCCTCCTCTTACTCCGCCCCTTCTTCTCCTGAGTTAACTCCGGCCGCCTCAATCAACGCCGTCTGCGACGTCACTCGCTACCCTAACTCGTGCATCTCCGGCATCTCCTTCCATCCTAGTTACTCCAACACCACCGACCCCGAAATCCTCTTCAAGTTCTCTCTCAGCGTCGCCATTGACGAGCTCTCGAAGCTCGCGGCCTACCCTGCGAAGCTCAGAGGCAATGTAAAGGACAAAAGTATACAGACGGCCCTCGATGTCTGTGGAAATGTTCTAGAAGATGCAGTGGATCGGCTCAACGACTCGATTTCGTCGCTGGAAGTCGGAGGAGGCGAGGCGATTCTAACGCCGGCTAAGATCGACGACCTTAGGACGTGGCTGAGCGCCACGATTACGGATCAGGAGACTTGTTTGGACGCCATTGAGGAATTGAATTCCACCGATGCTCAAGAGATTCTTCGTGATATGAGAACCGCTGTGGAGAACTCTACAGAATCTTCGAGTAATAGTTTGGCCATTGTTACGAAGATTCTTCGGGTACTTGCGAAGGTTCACCTCCCGCTCCATCGGAGGCTACTCGGGTCGGGTTACCCCGAGTGGGTTGGCCCGACAGAGCGGAGGCTGTTGCAGCGAGAGGCGAACAGAACGACATTGGCGGATGCAGTGGTGGCGAAGGACGGAACTGGACAGTACAGGACGATCAATGAGGCGGTGGCGGCCGTGAAGAAGAAGAGTGAGAGTAGATTTGTGATTTATGTGAAGGAAGGTGTTTACGTGGAAAATGTAGAATTGAAGAAGGACATGTGGAATGTGATGATTATCGGAGACGGGAAAAACAAAACCGTAATCTCTGGCAGCCGGAATAGAGTTGACGGCACACGCACTTTTGACACTGCCACTTTCGCTGTAAGCGGGAAGGGATTCATAGCCAAAGACATCGGATTCGTCAACAATGCAGGGCCGGCCAAACACCAAGCGGTGGCGGTGCGATCAGGCTCCGACAAGTCGGTGTTCTACAGGTGCTCCTTCGACGCTTTCCAGGACACCCTCTACGCCCATTCTAACCGTCAGCTCTACCGGGAATGTGACATCACCGGCACCGTCGACTTCATCTTCGGCAACGCAGCTTCAGTTTTCCAGAAATGCACCATCAAACCCAGAGAACCACTTCCCGGCCAGTTCAACACCGTCACTGCTCAGGGAAAGACTGATCCAAATCAGAACACTGGCATTGTAATCCACGACTCTTCAATTTCGACGCTTGATAATCTCACTGCTTCCACCTACCTTGGAAGGCCTTGGAAAAATTACTCTACCACTGTCATAATGAAGTCTAAAATTGGGCCTTTCGTGGACCCGTTGGGCTGGGCCGAATGGATCACTGATGTGGAGCCTCCCAGCATTATATTTTATGCTGAGTACCAGAATACTGGGCCGGGCTCAAATGTGACACAGAGGGTAAGATGGGCCGGTTATAAGCCCCACCTATCGGAAGATGAGGCTAGGAAGTTCTCGGTTGGGTCATTTATCCAGGCGAGTCAGTGGCTGCCTGATACAGGCGTGGAATTTCAGTCCTCGTTATAA 1842 0.5103 MSSSSSPSLYIKCNQSQKYCNPKPEENNFIMAMHSVNSFNRYGNLDEAENQLFRQKTRKRMIILILSSIVLGVVVVAGTFIHTNHTASSYSAPSSPELTPAASINAVCDVTRYPNSCISGISFHPSYSNTTDPEILFKFSLSVAIDELSKLAAYPAKLRGNVKDKSIQTALDVCGNVLEDAVDRLNDSISSLEVGGGEAILTPAKIDDLRTWLSATITDQETCLDAIEELNSTDAQEILRDMRTAVENSTESSSNSLAIVTKILRVLAKVHLPLHRRLLGSGYPEWVGPTERRLLQREANRTTLADAVVAKDGTGQYRTINEAVAAVKKKSESRFVIYVKEGVYVENVELKKDMWNVMIIGDGKNKTVISGSRNRVDGTRTFDTATFAVSGKGFIAKDIGFVNNAGPAKHQAVAVRSGSDKSVFYRCSFDAFQDTLYAHSNRQLYRECDITGTVDFIFGNAASVFQKCTIKPREPLPGQFNTVTAQGKTDPNQNTGIVIHDSSISTLDNLTASTYLGRPWKNYSTTVIMKSKIGPFVDPLGWAEWITDVEPPSIIFYAEYQNTGPGSNVTQRVRWAGYKPHLSEDEARKFSVGSFIQASQWLPDTGVEFQSSL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0423 613 ProSitePatterns Pectinesterase signature 1. 331 350 IPR018040 -
Alju11g0423 613 SMART PMEI_2 99 259 IPR006501 GO:0004857
Alju11g0423 613 Gene3D - 301 613 IPR012334 -
Alju11g0423 613 FunFam Pectinesterase 300 613 - -
Alju11g0423 613 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 104 264 IPR035513 -
Alju11g0423 613 PANTHER PECTINESTERASE 67 603 - -
Alju11g0423 613 FunFam Pectinesterase 100 264 - -
Alju11g0423 613 Pfam Plant invertase/pectin methylesterase inhibitor 103 259 IPR006501 GO:0004857
Alju11g0423 613 SUPERFAMILY Pectin lyase-like 305 610 IPR011050 -
Alju11g0423 613 Gene3D Invertase/pectin methylesterase inhibitor family protein 101 263 IPR035513 -
Alju11g0423 613 ProSitePatterns Pectinesterase signature 2. 450 459 IPR033131 -
Alju11g0423 613 NCBIfam pectinesterase inhibitor domain 80 263 IPR006501 GO:0004857
Alju11g0423 613 CDD PMEI-like_3 106 245 - -
Alju11g0423 613 Pfam Pectinesterase 306 598 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0423 Alju-ChrAlju11 4447149 4449621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0423 33 607 Carbohydrate Esterase AT1G53840 55.385 0.0 646