Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju11g0417 | ATGGGTGACTCGTCAGTGTCTAATGACAAATTGGGCGAATCTCCCGCGGTTGAAGTGACTGGAAAAATCATGGTGCTAGCTATAATAATCCTCTTCATGGTGGTTGTGTTTGTTCTGTTTCTCCATCTCTACGCCAAATGGTTCTGGTGGAGCATTGAAGAAACCACTCCTCCGCCGCCAACTCGCCGTCGCCGTCGACGCCGCTTTGTCTTCACCCCTGGGCAAGATCCGGCGATTTACGGCGGCCAGAGAAGTGGGCTTGATCCTTCAGTGCTTCTGTCCTTACCAGTTTTAGTGTACCAACCTGAAAATTTCAAAGATGGTTTGGAATGTGCTGTTTGTCTCTCTGAGCTTGTTGAAGGAGAAAAAGCGAGGCTTTTACCCAAATGTAATCATGGGTTTCATGTGGATTGTATAGATATGTGGTTTCAATCACATTCTACTTGTCCACTTTGCAGAAACCCAGTTGCTTCTGAAACCCCTAAATGCAATAGCACTTCAAGTGTTCGAGAAAATGCCGCAGAGAATAGTGGTAGCCAATCACGAGCGGTAGAAAATTTTCAAAACTCAGGTTTAGCTGCTATGAGTGGTTCAGAGTCTCCAAATTTTCCAACTAATGTGTTGGTTTGGGGGAACCAGACTCAAGTTAGTTCTATTAATACGTCTTCGGAAGAAGAGGGACCTTCATCTTCTTCTACAACTACAGCTACCAGTAGCAGTAACAACAACAACAATAGACGCCATGAAATGATGGTGATTGATATACCAAGTGAGGTCAATTCTTCATCTTTATCTCCTTCTGCAAGCAGGTTTGCTGAAGATGAGCTGAAATCACCAATGACCACAAGATTGAGGTCACTGAAGAGGCTTTTAAGCAGAGACAAAAGGTTAGGTCCTTGTAATCCTGGTCCTGGCTCTATAGATGTTGAACAAGCAGGGAGAGGACAAAGCTAA | 954 | 0.4444 | MGDSSVSNDKLGESPAVEVTGKIMVLAIIILFMVVVFVLFLHLYAKWFWWSIEETTPPPPTRRRRRRRFVFTPGQDPAIYGGQRSGLDPSVLLSLPVLVYQPENFKDGLECAVCLSELVEGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVASETPKCNSTSSVRENAAENSGSQSRAVENFQNSGLAAMSGSESPNFPTNVLVWGNQTQVSSINTSSEEEGPSSSSTTTATSSSNNNNNRRHEMMVIDIPSEVNSSSLSPSASRFAEDELKSPMTTRLRSLKRLLSRDKRLGPCNPGPGSIDVEQAGRGQS | 317 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju11g0417 | 317 | ProSiteProfiles | Zinc finger RING-type profile. | 111 | 153 | IPR001841 | - | |
Alju11g0417 | 317 | SMART | ring_2 | 111 | 152 | IPR001841 | - | |
Alju11g0417 | 317 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 90 | 162 | IPR013083 | - | |
Alju11g0417 | 317 | FunFam | RING-H2 finger protein ATL3 | 80 | 158 | - | - | |
Alju11g0417 | 317 | MobiDBLite | consensus disorder prediction | 217 | 248 | - | - | |
Alju11g0417 | 317 | Pfam | Ring finger domain | 110 | 153 | IPR001841 | - | |
Alju11g0417 | 317 | MobiDBLite | consensus disorder prediction | 158 | 182 | - | - | |
Alju11g0417 | 317 | MobiDBLite | consensus disorder prediction | 217 | 317 | - | - | |
Alju11g0417 | 317 | CDD | RING-H2_EL5-like | 110 | 153 | - | - | |
Alju11g0417 | 317 | SMART | FANCL_C_2 | 107 | 161 | - | - | |
Alju11g0417 | 317 | MobiDBLite | consensus disorder prediction | 276 | 295 | - | - | |
Alju11g0417 | 317 | SUPERFAMILY | RING/U-box | 94 | 159 | - | - | |
Alju11g0417 | 317 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 19 | 252 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju11g0417 | Alju-ChrAlju11 | 4407161 | 4408114 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju11g0417 | 1 | 295 | C3H Transcription Factor Family | AT1G53820 | 43.408 | 2.43e-71 | 221 |