Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0412 ATGACTGAGGATCGGCGAGTTTTGCCGCTGGTGTTCATCAGCACCTGCATTTTGGGTTGGATGCTCAGTGCTGTCAATGGAGACACAGATCAAACTGATGTTGCTGCTTTAAATGCTATGTTTACGGGTATGAACTCACCATCCCAACTAGGTTGGTCAGCAAATGGTGGTGATCCCTGTGGGGGACAGCCTTGGAAAGGCATTACTTGCTCAGGCAACAGAGTTACAGAGATTAAGTTGCCTAATCTTGGATTATCTGGATCATTCGGTTACCAGCTTCAAACCATGACATCTGTGACCAACCTAGATATGAGTCACAATAATTTTGGAGGTACCATACCATACCAACTTCCGCCAAATTTGCAGAGATTAGATCTTTCCAATAACCAATACACTGGGAGTATACCGTATTCAATTTCTGATATGAGTTCTCTTACATACCTAAGTTTTGCTCACAATCAACTACAGAATGCACTGAGTGACGTGTTTCAAAGGCTTTCTAAGCTAGCTACACTGGATCTCTCTTTCAATTCTATGTCAGGCAGCCTCCCTCAGGGTTTGAGCTCACTTACAAGCTTGAACAGCCTGTATCTGCAAGACAACCAGTTTACAGGGACTATTGATGTCCTCGCCAATCTTCCTCTTGATACTCTGAATGTGGAAAACAACCGTTTTACAGGCTGGATACCAGAACAGCTGAAGGGCATTAACCTCCAGACATCAGGAAATACATGGAACTCAGGTCCTGCCCCCCCTCCACCTCCAGGGACCCCCCCGGCAACTAGAAGGAACCGGCATCACAAATCTGATGGAAGTAATAGCCCTTCAGATGATGGCACCAGTGATGGGGGGAAAAAATCTGGTATAGGAGGTGGTGGTATTGCTGGAATAGTGATCTCCATCCTTCTTGTTGGGGCAGTAGTTGCTTTCTTTTTGGTGAGAAGAAAATCCAGGAAGTCATCTTCGGATATAGAAAAGCATGACAATGAGCCTTTTGCTCCTCTTAATTCAAACGAAGTTCACGAAGTGAAGTCGGCGCAAACTCCCTCTGTAGTTGACATGAAGACATTTGATACTTCTGCCTCAATAAATATCAAACCCCCACCTATGGAACGTCACAAATCATTTGATGAAGATGAATTTTCCAAGAAGCCAATTATTGTCAAGAAAACTGTAAAAGCTCCTGCAAATGTGAAATCGTATTCTATAGCGGACCTACAGATTGCCACTGGGAGCTTCAGTATGGATAACCTCCTTGGGGAGGGATCTTTTGGACGTGTTTATCGTGCTCACTCTGACGATGGAAAGGTTCTTGCCGTGAAGAAAATTGATTCATCTATCCTCCCCCATGATTCTGGAGATTTTATAGAAATAGTTTCAAACATCTCCAACTTGCACCATCCAAATGTAACAGGGCTTGTTGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCATAAAAGTGGATCATTACATGACTTACTCCACTTATCAGATGAATATAGCAAACCATTAATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTGCTTGATGCGGATCTTAATCCTCATCTCTCGGACTCAGGATTGGCAAGCTATATTCCAAATGCTGACCAGGTCTTGAACCGTAATGCTGGATCTGGGTATGATGCACCTGAAGTTGCTTTATCTGGTCAATATACTTTGAAGAGTGATGTTTACAGCTTTGGAATTGTCATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCTCAAAATCAAGATCAGAGCAATCTTTGGTACGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAGATGGTTGATCCTGCTCTGGAGGGGCTATACCCCGTTAAGTCTCTTTCTAGGTTTGCTGATGTCATTGCTCTGTGTGTTCAGCCGGAGCCGGAATTCCGACCACCTATGTCAGAGGTGGTTCAAGCATTGGTTCGATTAGTGCAGCGAGCTAACATGAGCAAAAGGACATTTGGAACAGATCAAGGAGGATCCAATCGAGGCGGCGATGAACAAGACAACACACAGGATATGTAA 2157 0.4376 MTEDRRVLPLVFISTCILGWMLSAVNGDTDQTDVAALNAMFTGMNSPSQLGWSANGGDPCGGQPWKGITCSGNRVTEIKLPNLGLSGSFGYQLQTMTSVTNLDMSHNNFGGTIPYQLPPNLQRLDLSNNQYTGSIPYSISDMSSLTYLSFAHNQLQNALSDVFQRLSKLATLDLSFNSMSGSLPQGLSSLTSLNSLYLQDNQFTGTIDVLANLPLDTLNVENNRFTGWIPEQLKGINLQTSGNTWNSGPAPPPPPGTPPATRRNRHHKSDGSNSPSDDGTSDGGKKSGIGGGGIAGIVISILLVGAVVAFFLVRRKSRKSSSDIEKHDNEPFAPLNSNEVHEVKSAQTPSVVDMKTFDTSASINIKPPPMERHKSFDEDEFSKKPIIVKKTVKAPANVKSYSIADLQIATGSFSMDNLLGEGSFGRVYRAHSDDGKVLAVKKIDSSILPHDSGDFIEIVSNISNLHHPNVTGLVGYCSEHGQHLLVYEFHKSGSLHDLLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDADLNPHLSDSGLASYIPNADQVLNRNAGSGYDAPEVALSGQYTLKSDVYSFGIVMLELLSGRKPFDSSKSRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTDQGGSNRGGDEQDNTQDM 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0412 718 SUPERFAMILY L domain-like 30 234 - -
Alju11g0412 718 Gene3D Ribonuclease Inhibitor 30 252 IPR032675 -
Alju11g0412 718 SUPERFAMILY Protein kinase-like (PK-like) 397 684 IPR011009 -
Alju11g0412 718 MobiDBLite consensus disorder prediction 695 718 - -
Alju11g0412 718 Gene3D Phosphorylase Kinase; domain 1 376 489 - -
Alju11g0412 718 MobiDBLite consensus disorder prediction 319 338 - -
Alju11g0412 718 Pfam Leucine rich repeat 152 203 IPR001611 GO:0005515
Alju11g0412 718 ProSitePatterns Protein kinases ATP-binding region signature. 419 442 IPR017441 GO:0005524
Alju11g0412 718 Gene3D Transferase(Phosphotransferase) domain 1 491 705 - -
Alju11g0412 718 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Alju11g0412 718 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 377 489 - -
Alju11g0412 718 ProSiteProfiles Protein kinase domain profile. 413 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0412 718 Pfam Protein tyrosine and serine/threonine kinase 415 684 IPR001245 GO:0004672|GO:0006468
Alju11g0412 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 490 698 - -
Alju11g0412 718 PANTHER LEUCINE RICH REPEAT KINASE 2 73 691 - -
Alju11g0412 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 256 - -
Alju11g0412 718 MobiDBLite consensus disorder prediction 695 711 - -
Alju11g0412 718 MobiDBLite consensus disorder prediction 239 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0412 Alju-ChrAlju11 4375407 4382161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0412 1 717 Strubbelig Receptor Gene Family AT1G53730 66.437 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Alju11g0412 PK_Tyr_Ser-Thr 2.1e-40 CL0016