Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0409 ATGCCAACGTTCTTCCCTTCATTTCCCAATCTTGCTGATGATCATTATTTTGGACCTGAAGCTCCTCATTTCCCCTGTTTTTTGTGGTCCTTTTGGTCTTATAACTTTTCCTCAAACTATAACATGGCTGAGGAACTGGATAAATCATTGCTTGATCCTGAGAGTTTCAATCGCGAGGGTGTTGATTTGGTACGTATACCTTTAGAAGAAGTGTTTGAACAGTTAAGAACATCGCGAAGAGGACTTTCAACTGAAGATGCTGAAGCTAGGCAGCTAATATTTGGTCCTAACAAACTTGAAGAGAAGAAAGAGAATAAAATACTGAAATTTCTGAGTTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCAGCAGCAATTATGGCAATTGTTCTTGCTAATGGGGGAGGGGAAGGTCCTGATTGGCAAGACTTTGTAGGAATCATGTGCCTGCTAGTAATAAACTCAACAATCAGTTTTATAGAAGAAAATAATGCTGGGAATGCCGCGGCAGCACTGATGGCTCGTTTAGCTCCTAAAACAAAAGTTCTTAGAGATGGGCATTGGCAAGAGCAAGATGCATCTATTTTAGTACCTGGAGATATAATCAGCATAAAGCTGGGAGACATCATCCCAGCTGATGCTCGCCTGCTTGAAGGCGACCCTCTTAAAATTGATCAGGCAACTCTCACCGGAGAATCTCTTCCTGTCACCAAGAAGACAGGTGATGAAGTCTTTTCTGGTTCAACTTGTAAGCATGGTGAGATAGAAGCCGTAGTAATAGCCACTGGAGTTCAGACATTTTTTGGAAAGGCTGCGTACTTGGTTGATAGTACTGAAGTTGTTGGGCACTTTCAGAAGGTCCTAACAGCAATTGGGAACTTCTGCATTTGCTCTATAGCTGTAGGAATGGTACTTGAGATCATTGTGATGTTCCCAATACAGCATCGCTCATATAGGGATGGAATCAACAACCTACTTGTTCTCTTAATTGGAGGAATACCCATAGCTATGCCAACAGTGTTATCTGTTACACTTGCAATTGGCTCTCATAGACTTTCACAACAGGGAGCCATCACAAAAAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCCTATGCAGTGACAAAACTGGAACTCTTACTTTGAATCGCCTCACTGTTGATAGAAGCCTTATTGAGGTCTTTGACAGAAATATGGACAGAGATAAGGTTGTTCTACTAGCAGCCAGAGCAGCTAGACTGGATAACCAGGATGCCATTGATGCTGCCATTGTTAATATGCTATCTGATCCAAAGGAGGCGCGTGCAAACATAACTGAAGTTCATTTTCTACCTTTCAACCCAGTTGATAAACGTACTGCGATTACATATATTGATTGTGAAGGAAACTGGTATAGAGCCAGCAAAGGAGCTCCTGAACAGATTCTAAGTATGTGCCAAGAGAAAGATGAGATTGCTGGGAAAGTGCATGCAATCATTGACAAGTTTGCTGAAAGGGGCCTGCGATCTCTTGCTGTTGCTTATCAGGAAGTTCTTGAAAAGTCTAAGGATAGTCCTGGAGATCCTTGGACTTTCTGCGGGTTGTTGCCCTTGTTTGATCCTCCAAGACATGATAGTGCTGAGACCATTCGTAGAGCACTTAATCTTGGAGTCTGTGTCAAGATGATTACAGGGGACCAGTTGGCGATTGCAAAAGAAACAGGCCGAAGACTAGGTATGGGGACCAACATGTACCCTTCTTCATCATTGTTGGGTCGTGACAAAGATGAAAATGAAGCTCTCCCAGCAGATGAGCTGATTGAAAAGGCAGACGGCTTTGCTGGTGTATTTCCCGAACACAAGTATGAAATTGTGAAAATCTTACAAGAAAAGAAGCATATAGTTGGAATGACTGGAGATGGTGTAAATGATGCGCCGGCTTTAAAGAAAGCAGATATTGGAATTGCTGTGTCAGATGCTACGGATGCCGCAAGAAGTGCTGCTGATCTAGTCTTAACTGAGCCAGGCTTAAGTGTGATTGTCAGTGCTGTGTTAACCAGCCGAGCTATATTTCAAAGAATGAAAAACTATACAATATATGCAGTTTCCATAACCATAAGGATAGTGCTTGGTTTTGTGCTCCTGGCATTGATTTGGGAGTATGATTTTCCACCTTTCATGGTCCTGATCATAGCAATACTGAATGATGGAACTATCATGACCATATCCAAAGACAGGGTAAAACCATCTCCAACACCAGACAGTTGGAAGTTGCCTGAGATCTTTGCAACTGGAATTGTCATTGGCACTTATCTTGCTTTGATCACTGTCCTATTCTACTGGGTCATAGTGAAGACCACTTTCTTTGAGACACACTTTCACGTAACCTCCTTATCCAGCGACAGTGAGAAAGTCTCATCTGCTGTGTATCTTCAAGTTAGCATAATTAGCCAAGCTTTAATCTTTGTCACCCGTAGTCGAGGATGGTCTTTTATGGAGAGACCTGGAGTTCTGTTGATGTGTGCCTTTGTAATTGCTCAACTGGTGGCAACCTTAATAGCTGTCTATGCACATATCAGCTTCGCTTATATCAGAGGGATTGGATGGGGATGGGCTGGTGTGATATGGTTATATAGTTTAGTCTTCTATATACCTTTGGACATTATCAAGTTTGTTGTACGCTATGCCTTGAGTGGAGAAGCCTGGAATCTCGTATTTGATAAAAAGAGTGCTTTTACTTCGAAGAAAGATTATGGGAAGGAAGATAGAGCTGCAAAATGGATTCTTTCTCAGGAAAGCCTACAAGGATTGCATACCATAAACATGCGGATTAATGTAAGCAGATCATCTTTATTGGCAGAACAGGCCAAGCGTAGAGCTGAAATAGCCAGGCTGGGAGAATTGCATACTCTGAGGGGATATGTGGAGTCTGTTATGAGACTAAAAAATTTAGACCAGTGTGTGATCCAATCAGCTTACACAGTTTGA 2976 0.421 MPTFFPSFPNLADDHYFGPEAPHFPCFLWSFWSYNFSSNYNMAEELDKSLLDPESFNREGVDLVRIPLEEVFEQLRTSRRGLSTEDAEARQLIFGPNKLEEKKENKILKFLSFMWNPLSWVMEAAAIMAIVLANGGGEGPDWQDFVGIMCLLVINSTISFIEENNAGNAAAALMARLAPKTKVLRDGHWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQATLTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVQTFFGKAAYLVDSTEVVGHFQKVLTAIGNFCICSIAVGMVLEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRSLIEVFDRNMDRDKVVLLAARAARLDNQDAIDAAIVNMLSDPKEARANITEVHFLPFNPVDKRTAITYIDCEGNWYRASKGAPEQILSMCQEKDEIAGKVHAIIDKFAERGLRSLAVAYQEVLEKSKDSPGDPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRDKDENEALPADELIEKADGFAGVFPEHKYEIVKILQEKKHIVGMTGDGVNDAPALKKADIGIAVSDATDAARSAADLVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALITVLFYWVIVKTTFFETHFHVTSLSSDSEKVSSAVYLQVSIISQALIFVTRSRGWSFMERPGVLLMCAFVIAQLVATLIAVYAHISFAYIRGIGWGWAGVIWLYSLVFYIPLDIIKFVVRYALSGEAWNLVFDKKSAFTSKKDYGKEDRAAKWILSQESLQGLHTINMRINVSRSSLLAEQAKRRAEIARLGELHTLRGYVESVMRLKNLDQCVIQSAYTV 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0409 991 Pfam E1-E2 ATPase 177 355 - -
Alju11g0409 991 Gene3D - 943 991 - -
Alju11g0409 991 FunFam Plasma membrane ATPase 528 682 - -
Alju11g0409 991 Gene3D - 388 535 IPR023299 GO:0000166
Alju11g0409 991 Gene3D - 373 671 IPR023214 -
Alju11g0409 991 CDD P-type_ATPase_H 81 887 IPR006534 GO:0008553|GO:0016020|GO:0120029
Alju11g0409 991 SUPERFAMILY HAD-like 372 681 IPR036412 -
Alju11g0409 991 SFLD Haloacid Dehalogenase 358 686 - -
Alju11g0409 991 FunFam Plasma membrane ATPase 179 263 - -
Alju11g0409 991 SUPERFAMILY Calcium ATPase, transduction domain A 179 275 IPR008250 -
Alju11g0409 991 FunFam Plasma membrane ATPase 388 535 - -
Alju11g0409 991 SFLD p-type atpase 358 686 IPR044492 -
Alju11g0409 991 PANTHER CALCIUM-TRANSPORTING ATPASE 70 927 - -
Alju11g0409 991 Gene3D - 179 263 - -
Alju11g0409 991 SMART Cation_ATPase_N_a_2 62 134 IPR004014 -
Alju11g0409 991 NCBIfam HAD-IC family P-type ATPase 148 396 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju11g0409 991 NCBIfam HAD-IC family P-type ATPase 608 719 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju11g0409 991 NCBIfam plasma-membrane proton-efflux P-type ATPase 81 852 IPR006534 GO:0008553|GO:0016020|GO:0120029
Alju11g0409 991 PRINTS H+-transporting ATPase (proton pump) signature 634 650 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju11g0409 991 PRINTS H+-transporting ATPase (proton pump) signature 806 827 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju11g0409 991 PRINTS H+-transporting ATPase (proton pump) signature 492 510 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju11g0409 991 PRINTS H+-transporting ATPase (proton pump) signature 665 690 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju11g0409 991 PRINTS H+-transporting ATPase (proton pump) signature 606 622 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju11g0409 991 SUPERFAMILY Calcium ATPase, transmembrane domain M 62 893 IPR023298 -
Alju11g0409 991 ProSitePatterns E1-E2 ATPases phosphorylation site. 378 384 IPR018303 -
Alju11g0409 991 FunFam ATPase 4 plasma membrane-type 624 861 - -
Alju11g0409 991 PRINTS P-type cation-transporting ATPase superfamily signature 376 390 - -
Alju11g0409 991 PRINTS P-type cation-transporting ATPase superfamily signature 552 562 - -
Alju11g0409 991 PRINTS P-type cation-transporting ATPase superfamily signature 634 653 - -
Alju11g0409 991 PRINTS P-type cation-transporting ATPase superfamily signature 657 669 - -
Alju11g0409 991 PRINTS P-type cation-transporting ATPase superfamily signature 226 240 - -
Alju11g0409 991 PRINTS P-type cation-transporting ATPase superfamily signature 530 541 - -
Alju11g0409 991 Pfam haloacid dehalogenase-like hydrolase 372 648 - -
Alju11g0409 991 Gene3D - 141 861 - -
Alju11g0409 991 Pfam Cation transporter/ATPase, N-terminus 66 128 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0409 Alju-ChrAlju11 4290128 4303367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0409 42 991 Primary Pumps ATPases AT1G17260 79.789 0.0 1524