Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0406 ATGGTTATTCATCTTCATCCTTGGAACTTCAGAACCAGAACATCCCCATCAGAATTCAACAGGGTCAAAGCATGGTCACGCCGATGCAATAATCCCCAAACTCCTCTTCTCAGATTGGTCGATGACACCCATATGTCTGCTTTCTCTCCTCCGTCTTCATCGTCTTCTTCATCTTCATTTTACATGGAGAAAGATCGCCAATACGACATCTTTCCCTTCTGGGTATCTGTTCTGATGACCCTCGAAGCTTCAAAGCAAAGACAAAGACCAAACCCATCAACATCAGCTTCTGCAACAAGGCCCTCCTCCACCATTATTCTCAGGGATCCTACGAGGTTCATGGCCTTTCTCTTGGTACCGTTAGTTCTTCTGTCTTGCCTTGTTGTCACTGTCTCCTCTTCTTGTACCCAATTGGATAAAGATTCTCTCTTGGACTTCTACAACAATATATCCACAGAACCTCACCCTCCTCTTAATTGGTCTTCTTCTGTTGATTGCTGCTCTTGGGAAGGCATTCTTTGCGATGAGAGCAATATGGGTAATGGGGATCACCGAGTTATTGGCTTGTTGCTTCCATCCAGAGGTCTCTCTGGTTCTATATCCCCTGCTCTCACGAACCTCACTGGTCTGTCTCAGCTCAATCTCTCTCATAATCGACTTTCTGGTAACCTCCCAACCCAGTTCATCTCACTCCTTAGTCACCTGCAGATTCTTGATTTAAGCTACAATCGTCTCTCTGATGAGCTGCCAGCATCTGTTGTTAATAATAATAACGAAACCAGTAGTATTATCCAGGAGCTTGATTTGTCTAGCAATCTATTTCAAGGAACACTCCCTTCTTCTTTCCTCCAGTACCTTGGAGCTGCAGCAGCAGCAGGCACTTTGACATCTTTTAATGTTAGTAACAATAGCTTCATAGGTCCAATTCCCACTTCTCAACTTTGCATTAATGACAGTCTCAGATTCTTGGATCTTTCCTACAATAAATTCAACGGCTCAATTCAATCTGGATTGGGAGCATGTTCCAAGCTTGAGATTTTCCGAGCAGGTTTCAATCTTCTCTCTGGGCCTATTCCTAGTGATCTTTTTGGTGCTGTTTCCCTCAGAGAGATCTCCTTGCCCCTCAATCAGCTCTCAGGAAATATTGATGGTGGCATTGCTAGACTTACCAACCTCACAGTCCTGGAGCTCTTCTCCAATAATTTCAGAGGACTCATACCACGAGATATTGGGAAGCTATCCAAGCTGGAAAAGCTACTCCTTCATATAAACAATTTGACGGGTACTTTACCCCCATCTCTGGTGAACTGTGTCAATCTAGTTGAGTTAAATTTGAGGGTCAACTTCTTGAAGGGGAATCTTGTAGATTTTGATTTCTCCGGATTCCAGCGGCTTGTTACTCTTGATCTTGGCAACAATAATTTTACGGGCACTTTACCAACAACCCTTTATGCATGCAAATCACTAGCTGCGGTAAGACTGGCATCTAATGATCTCGTGGGACAGATCACACCAGATATACTTAGACTTGAGTCTCTGTCTTTCCTATCGATATCTACCAACTACCTAAGAAATTTCACTGGAGCTATGAAGATACTTGCGGGACTCAAGAACCTTAGTAGCCTTGTCCTCTCAAAGAATTTTTATAATGAAACCTTGCCGTATGATGAGAGCTTAGTAGGCCCAGGTGGATTTCAAAAACTTCAAGTTCTAGCCTTGGGTGGTTGTAATTTCACAGGTCAAATACCACGCTGGCTTGCAAGGCTTAGGATGCTCGAGGTCATTGATCTGTCCTTTAATCTCGTGACCGGTTCAATTCCTCCTTGGTTGGGTAAACTTCCACAGCTATTCTACGTAGATTTGTCTCATAACCAACTTACAGGAGTATTTCCCGCGGAACCCACAGGATTTCCAGCATTAACATCACAACAGACAAATGATAGAATAGTAAGGTCTTACCTGGAGTTACCTGTCTTCATTGTGCCGCAAAATGCTTCTCAGCAGCAGTATAATCAGCTTTCCAACCTACCGCCAGTGATATATCTGAGAAACAATGGTCTCAGTGGCGATATTCCTAAGGAGATTGGCCTAATGAAAGTCCTACATCAGCTGGACCTGGGTAATAACAACTTCTCTGGCAGTATTCCTGTTCAAATTTCTAACTTGACTAATTTAGAGAAGTTAGACCTCTCAGGAAACCAACTGTCTGGTGAAATTCCTTCTTCACTCAAAAGCCTCCATTTCTTGTCATTTTTTACTGTGGCAAACAATGATCTTCAAGGAGAGATACCAACGGGTGGCCAATTTGATACTTTCCCTCCTTCCAGCTTTTCAGGAAACCCGCAATTGTGCGGTTCAGTTATACAACGTTCTTGTCCTAGTCCGCAAGGTAACAGCAGCACAATTCATCGCACTTCGAACAAAAAAATCATGATTGGACTTGTTGTCGCAGTCTGTTTGGGCACTGTTGCTATCATGATTGTGTTGGTAATCTGGATACTTTCCAAGAGGAGGATCAATCCAGGGGGAGACCCAGACAAGATTGAACTGGATACGATTTCTGCCCACTCCAACAGTGGTGTTCATCCTGAAGTTGATAAGGAGGCTAGTTTAGTGGTGATGTTCCCCAATAAAACAAATGAAATCAAAGATCTCAACATATTTGAGATCTTAAAAGCCACTGAAAATTTCAGTCAAGCAAACATAATAGGATGTGGGGGTTTTGGTTTGGTTTTTAAAGCAACGTTACCTGATGGAACTAAGCTAGCTATCAAGAAACTTTCAGGAGATTTGGGGCTTATGGAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTGTCAACGGCTCGGCACGAGAATCTGGTTGCATTGCAAGGCTACTGTGTACATGATGGCTTTCGGCTTCTCATATATTCTTTCATGGAAAATGGAAGTCTGGATTACTGGTTGCATGAGAAGCCTGATGGTGCAACTCAACTTGATTGGCCAACTCGACTGAAGATTGCACGGGGTGCGAGTTATGGGTTGGCTTACATGCATCAGATATGTGAACCACACATTGTCCATCGCGATATAAAGTCAAGCAACATCCTCCTTAATGAGAAGTTTGAGGCACATGTTGCTGATTTCGGGTTGTCTCGGTTAATTCTTCCATATCACACTCATGTTACCACTGAACTTGTAGGTACATTAGGTTACATTCCCCCTGAGTATGGACAAGCATGGGTTGCCACTCTCAGGGGAGATGTGTACAGCTTTGGGGTTGTCATGCTTGAGCTGCTCACTGGGAGGAGACCTGTTGACATATGCAAGCCAAAAATGTCAAGGGAATTGGTTGGTTGGGTGCAACAAATGAGGAGTGAAGGAAAACAAGACGAAGTTTTCGACCCTCTTCTGAGAGGAAAGGGCTTTGAAGAGGAGATGCTGCAGGTACTTGATGTGGCCTGCATGTGTGTCAACCTGAATCCTTTCAAGAGACCGAGTATCAGAGAAGTTGTTGATTGGTTGAAGAATGTAGGATCAGCCAAACAACAGAATAAAGAGTAG 3543 0.4349 MVIHLHPWNFRTRTSPSEFNRVKAWSRRCNNPQTPLLRLVDDTHMSAFSPPSSSSSSSSFYMEKDRQYDIFPFWVSVLMTLEASKQRQRPNPSTSASATRPSSTIILRDPTRFMAFLLVPLVLLSCLVVTVSSSCTQLDKDSLLDFYNNISTEPHPPLNWSSSVDCCSWEGILCDESNMGNGDHRVIGLLLPSRGLSGSISPALTNLTGLSQLNLSHNRLSGNLPTQFISLLSHLQILDLSYNRLSDELPASVVNNNNETSSIIQELDLSSNLFQGTLPSSFLQYLGAAAAAGTLTSFNVSNNSFIGPIPTSQLCINDSLRFLDLSYNKFNGSIQSGLGACSKLEIFRAGFNLLSGPIPSDLFGAVSLREISLPLNQLSGNIDGGIARLTNLTVLELFSNNFRGLIPRDIGKLSKLEKLLLHINNLTGTLPPSLVNCVNLVELNLRVNFLKGNLVDFDFSGFQRLVTLDLGNNNFTGTLPTTLYACKSLAAVRLASNDLVGQITPDILRLESLSFLSISTNYLRNFTGAMKILAGLKNLSSLVLSKNFYNETLPYDESLVGPGGFQKLQVLALGGCNFTGQIPRWLARLRMLEVIDLSFNLVTGSIPPWLGKLPQLFYVDLSHNQLTGVFPAEPTGFPALTSQQTNDRIVRSYLELPVFIVPQNASQQQYNQLSNLPPVIYLRNNGLSGDIPKEIGLMKVLHQLDLGNNNFSGSIPVQISNLTNLEKLDLSGNQLSGEIPSSLKSLHFLSFFTVANNDLQGEIPTGGQFDTFPPSSFSGNPQLCGSVIQRSCPSPQGNSSTIHRTSNKKIMIGLVVAVCLGTVAIMIVLVIWILSKRRINPGGDPDKIELDTISAHSNSGVHPEVDKEASLVVMFPNKTNEIKDLNIFEILKATENFSQANIIGCGGFGLVFKATLPDGTKLAIKKLSGDLGLMEREFKAEVEALSTARHENLVALQGYCVHDGFRLLIYSFMENGSLDYWLHEKPDGATQLDWPTRLKIARGASYGLAYMHQICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDICKPKMSRELVGWVQQMRSEGKQDEVFDPLLRGKGFEEEMLQVLDVACMCVNLNPFKRPSIREVVDWLKNVGSAKQQNKE 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0406 1180 Pfam Leucine rich repeat 567 626 IPR001611 GO:0005515
Alju11g0406 1180 FunFam Leucine-rich repeat receptor-like kinase 139 264 - -
Alju11g0406 1180 ProSiteProfiles Leucine-rich repeat profile. 724 746 IPR001611 GO:0005515
Alju11g0406 1180 Gene3D Ribonuclease Inhibitor 457 800 IPR032675 -
Alju11g0406 1180 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1019 1031 IPR008271 GO:0004672|GO:0006468
Alju11g0406 1180 SUPERFAMILY L domain-like 160 450 - -
Alju11g0406 1180 Pfam Leucine Rich Repeat 724 746 IPR001611 GO:0005515
Alju11g0406 1180 SMART LRR_typ_2 462 486 IPR003591 -
Alju11g0406 1180 SMART LRR_typ_2 613 636 IPR003591 -
Alju11g0406 1180 SMART LRR_typ_2 389 412 IPR003591 -
Alju11g0406 1180 SMART LRR_typ_2 232 256 IPR003591 -
Alju11g0406 1180 SMART LRR_typ_2 207 231 IPR003591 -
Alju11g0406 1180 SMART LRR_typ_2 722 746 IPR003591 -
Alju11g0406 1180 SMART LRR_typ_2 413 437 IPR003591 -
Alju11g0406 1180 FunFam Leucine-rich repeat receptor-like protein kinase 973 1179 - -
Alju11g0406 1180 Gene3D Transferase(Phosphotransferase) domain 1 973 1180 - -
Alju11g0406 1180 Pfam Leucine Rich repeat 233 248 IPR001611 GO:0005515
Alju11g0406 1180 Gene3D Ribonuclease Inhibitor 364 456 IPR032675 -
Alju11g0406 1180 FunFam Tyrosine-sulfated glycopeptide receptor 1 459 797 - -
Alju11g0406 1180 Pfam Protein kinase domain 898 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0406 1180 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 352 523 - -
Alju11g0406 1180 SUPERFAMILY L domain-like 355 781 - -
Alju11g0406 1180 Gene3D Phosphorylase Kinase; domain 1 859 972 - -
Alju11g0406 1180 Pfam Leucine rich repeat N-terminal domain 139 175 IPR013210 -
Alju11g0406 1180 Gene3D Ribonuclease Inhibitor 136 286 IPR032675 -
Alju11g0406 1180 SUPERFAMILY Protein kinase-like (PK-like) 883 1168 IPR011009 -
Alju11g0406 1180 ProSiteProfiles Protein kinase domain profile. 897 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0406 1180 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 359 454 - -
Alju11g0406 1180 ProSitePatterns Protein kinases ATP-binding region signature. 903 926 IPR017441 GO:0005524
Alju11g0406 1180 PRINTS Leucine-rich repeat signature 616 629 - -
Alju11g0406 1180 PRINTS Leucine-rich repeat signature 722 735 - -
Alju11g0406 1180 Gene3D Ribonuclease Inhibitor 287 363 IPR032675 -
Alju11g0406 1180 SMART serkin_6 897 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0406 Alju-ChrAlju11 4261217 4265104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0406 93 828 Miscellaneous Gene Families AT1G17240 49.459 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Alju11g0406 Pkinase 1.4e-37 CL0016