Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0405 ATGCCAACCCCATTAAAATCATCAAGAAGAAGAAGATCCTATACCTCTCCTTCATCTTCCATAATTATGGTTATGAGGTTAATGGCCTTTTTCACAGTACCATTGGTTCTGTCTTGCCTTGTTGTCACATTCTCCTCCTCTTGTACCCAATTGGATAAAGATTCTCTCTTGGACTTCTACAACAATATATCCACAGAACCTCACCCTCCTCTTAATTGGTTTTCTTCTGTTGATTGCTGCTCTTGGGAAGGCATTCTTTGCGATGAGAGCAATATGGGTAATGGGGATCACCGAGTTATTGGCTTATTGCTTCCATCCAGAGGTCTCTCTGGTTCGATATCCCCTGCTCTCACGAACCTCACTGGTCTGTCTCAGCTCAATCTCTCTCAAAATCGACTTTCTGGTAACCTCCCAACCCAGTTCATCTCACTCCTTAGTCACCTGCAGATTATTGATTTAAGCTACAATCGTCTCTCTGATGAGTTGCCAGCATCTGTTGTTAATAATAATAACGAAACCAGTAGTATTATCCAGGAGCTTGATTTGTCTAGCAATCTATTTCAAGGAACACTCCCTTCTTCTTTCCTCCAGTACCTTGGAGCTGCTACAGCAGCAGGCACTTTGACATCTTTTAATGTTAGTAACAATAGCTTCATAGGTCCAATTCCCATTTCTCATATTACGACTGAACTTGTAGGTACTTTAGGTTATATTCCACCTGAGTATGGACAAGCATCTGAGGCCACTCTTCGGGGAGATGTGTACAGCTTTGGCATTCTCATGCTTGAGTTGATCACTGGGAGGAGGCCCCTTGACATGTGCAAGACAAAAATGCCAAAGGAACAGGTTCTTTGGATGCAACAAATGAGGAGTGAAGGAAAACAAGATCAAGTCTTCGACCCACTTTTAAGAGGAAAGGGCTTTGAAGAGGAGGTGCTGCAGGTATTTGATGTGGCTTGCATGTGTGTCAGCCAAAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGCCGATTGGCTGAAGAACGTGGGATCAGCCAAACAACACCAGAATGAAGACTAG 1062 0.4331 MPTPLKSSRRRRSYTSPSSSIIMVMRLMAFFTVPLVLSCLVVTFSSSCTQLDKDSLLDFYNNISTEPHPPLNWFSSVDCCSWEGILCDESNMGNGDHRVIGLLLPSRGLSGSISPALTNLTGLSQLNLSQNRLSGNLPTQFISLLSHLQIIDLSYNRLSDELPASVVNNNNETSSIIQELDLSSNLFQGTLPSSFLQYLGAATAAGTLTSFNVSNNSFIGPIPISHITTELVGTLGYIPPEYGQASEATLRGDVYSFGILMLELITGRRPLDMCKTKMPKEQVLWMQQMRSEGKQDQVFDPLLRGKGFEEEVLQVFDVACMCVSQNPFKRPSIREVADWLKNVGSAKQHQNED 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0405 353 Pfam Protein kinase domain 228 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0405 353 Gene3D Ribonuclease Inhibitor 51 177 IPR032675 -
Alju11g0405 353 PRINTS Leucine-rich repeat signature 123 136 - -
Alju11g0405 353 PRINTS Leucine-rich repeat signature 145 158 - -
Alju11g0405 353 FunFam Leucine-rich repeat receptor-like kinase 52 175 - -
Alju11g0405 353 Pfam Leucine rich repeat N-terminal domain 52 88 IPR013210 -
Alju11g0405 353 SUPERFAMILY Protein kinase-like (PK-like) 225 343 IPR011009 -
Alju11g0405 353 Gene3D Transferase(Phosphotransferase) domain 1 205 353 - -
Alju11g0405 353 SUPERFAMILY L domain-like 47 225 - -
Alju11g0405 353 ProSiteProfiles Protein kinase domain profile. 1 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0405 353 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 234 347 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0405 Alju-ChrAlju11 4238955 4240016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0405 30 223 Miscellaneous Gene Families AT1G17240 46.939 1.82e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Alju11g0405 Pkinase 8.2e-09 CL0016