Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0395 ATGTTAGCTTCTGTTCTTTTTGGATTACTCCTCCTCCTTGCTTGCTTGCCTTTTTCTTGTGGTTCCTTTCAGAACCAAGAAAAGGCACTAGAATCATCCACTAAGAATTTGCTTCCCAATTCCTGCAACGAAACATGTGGGAAACACCATGTTCCTTTTCCATTCTACGTGAACTCGTCGTGTGTATCAATTTCTCATGCTTTCAATCTCTCTTGCTCGAATTCCTCTTCCCTTCTTCTGAGAATCGGCTCAGAAAGCTACCCAGTTATTGAATTCTTCCCTGACGGCGTCCTAGTGGACTTCCCAGGCATATTATCATGTCGCCAGTACAATGACCTGAACTCGTTTGGTAAAAGTTTTGTGAGAAATGAACACTTTGGAGTCTCAGTGGAAAACGTCATTGGTCTCTATGACTGTGAAGATTCTTCTCTGTGCAAAGCAGATTGTGAAACAGTTGACTTGCCGGGTTGTGACGGAGACGGTGACGGTGGAGGTGGCTCACTTGGGTGCTGCTATCCACTTTCAGACCATAGTATATGGCATGTAGGAGAAGGGTTTTCAGTGTTTTCTGAGTATGGATGCAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGGGTCAAATTCAGGAAAGCGAGGGCTAAAATTGGAATGGGCTGTTCCTGATAACTCATCCAAGCAAGTTTGTTCAAGCAATGCAGAATTAGTGAATGCTACATCAGTTGAAGGTGGAGCAAGGTGTATGTGTCAAGATGGGTATGTTGGTGATGGATTTGCTAATGGAACTGGATGCTTGCAGGCCTGTGTGAAGGATGGACATGAAGCATATGGTAGTGACTGCTACATCAGAAGAAAGGATCAAAGAAAATTTGTCATCATCGCAGGAATCCTTGGTCCAGTTCTTATTGTTGCCTCACTACTAGCACTATTTTGTCTACTTAAAAGACCACAAAAACCAAGCACTTTTGACAATGAGCAGGCTTACTATCACCACACCTCATTTCAAAAGGCTTGTAGAACTCAGTTGTTCAGCCTCCACGAGCTAGAGGAAGCGACGAAAGATTTCGCTGAGGATCAGAAACTCATGCAGAGCAGCAACAATGGTACAATTTTCGCCGGTGTTCTTGGGGGTGGATCACATGCAGCTGTCCACAAGTTGCAATATGATACTGAGAAAGACCTTATACAAGTCCTGGCACAAATTGAGGTCCTGTCTGCTATTTCACATAAGAACTTGGCCCGCCTTCTCGGATGCTGTATATATTCTGGCTATCCTTCTTTGGTTGTCTATGAGTATCCTGCAAATGGTACCTTGGAGGACCATTTACATCAAAGAAAGGGACATAAACTCTGTTTGGACTGGAACAAGAGATTGATTATTGCGGCAGAAACAGCTAATGTTCTTGCATTCTTACAATATGACATTTCCCCTCCCATATTCCACCACAACCTTAAACCTGGTTGCATATTCCTGGATGATGATTTTTCTGTCAAAATTGCAGGATTCAGGCTTGTCAATACCAAATTCAACTATCGCTATGATAACAATATTGAAGGCTTGAGTTTCTGCAAGAATGATGTTTATGACATGGGTGTGTTGCTTCTTGAGATCATTTCAGGCTCAAATAATAATCACTTGAACACACCAACCCAGGCACTTCAGAAGATTAGGACAGGGAAGCTCGAAGAAATCATCGATCCCCTTCTCTACTACCACGAGCGCACTCGTTCTTGCCAAGAACAGATACAGATAATAGCGGACCTAGCAACAAGATGTATGTTGTTTGGTTCAGATGGGAAGCTGGGAATGATTGATGTTGCAAGAGAGTTGACGCACATAACAAAAGAGAGTGTTGAAGGAGGAATCACAAGAGGAGGACCTGCTTTGGAAGAGACATTCTCAAATTCTAGCCTTCTTCAAATGATATCAACGTCTCCTGATTCTATGCATGTCCCTTAA 1956 0.43 MLASVLFGLLLLLACLPFSCGSFQNQEKALESSTKNLLPNSCNETCGKHHVPFPFYVNSSCVSISHAFNLSCSNSSSLLLRIGSESYPVIEFFPDGVLVDFPGILSCRQYNDLNSFGKSFVRNEHFGVSVENVIGLYDCEDSSLCKADCETVDLPGCDGDGDGGGGSLGCCYPLSDHSIWHVGEGFSVFSEYGCRGFSSWAVLRGSNSGKRGLKLEWAVPDNSSKQVCSSNAELVNATSVEGGARCMCQDGYVGDGFANGTGCLQACVKDGHEAYGSDCYIRRKDQRKFVIIAGILGPVLIVASLLALFCLLKRPQKPSTFDNEQAYYHHTSFQKACRTQLFSLHELEEATKDFAEDQKLMQSSNNGTIFAGVLGGGSHAAVHKLQYDTEKDLIQVLAQIEVLSAISHKNLARLLGCCIYSGYPSLVVYEYPANGTLEDHLHQRKGHKLCLDWNKRLIIAAETANVLAFLQYDISPPIFHHNLKPGCIFLDDDFSVKIAGFRLVNTKFNYRYDNNIEGLSFCKNDVYDMGVLLLEIISGSNNNHLNTPTQALQKIRTGKLEEIIDPLLYYHERTRSCQEQIQIIADLATRCMLFGSDGKLGMIDVARELTHITKESVEGGITRGGPALEETFSNSSLLQMISTSPDSMHVP 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0395 651 SUPERFAMILY Protein kinase-like (PK-like) 337 609 IPR011009 -
Alju11g0395 651 Gene3D Phosphorylase Kinase; domain 1 327 431 - -
Alju11g0395 651 Gene3D Transferase(Phosphotransferase) domain 1 433 621 - -
Alju11g0395 651 Pfam Protein tyrosine and serine/threonine kinase 362 557 IPR001245 GO:0004672|GO:0006468
Alju11g0395 651 ProSiteProfiles Protein kinase domain profile. 355 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0395 651 Pfam Wall-associated receptor kinase galacturonan-binding 42 91 IPR025287 GO:0030247
Alju11g0395 651 Gene3D Laminin 225 259 - -
Alju11g0395 651 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 32 613 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0395 Alju-ChrAlju11 4140007 4142579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0395 42 612 Receptor kinase-like Gene Family AT2G23450 28.900 8.31e-53 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Alju11g0395 PK_Tyr_Ser-Thr 1.2e-14 CL0016