Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0394 ATGGACGCATACTCTTCTGGAGAAGAAGTGGTCGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATAAGTTCCTTGAAGCTCTAAAGCTATATGGAAGAGCATGGCAGCGCATAGAAGAGCATATAGGTACAAAGACTGCTGTGCAGATCAGGAGCCATGCGCAGAAGTTCTTTTCAAAGTTGGAGAAAGAGGCCCTTGTCAAAGGTATTCCAATTGGGCAATCTATTGACATAGACATACCTCCTCCACGACCCAAAAGAAAACCAAGCAATCCTTATCCTCGGAAGACTAGTGCCAGTGCCCAAACATCACATGGCGGAGGAAAGGATGGAAAACTTCTTGTGTCAGTTTCATCTTCACATTGTAAACAAGCACTGGACTTGGAGAAGGAACCACAGCCAGAGGAGGCACCCTGTTCCTTTGTTACGTCAGCAGACAAGAGTTCAATGTCAGTGCCACAGAGAAATCCATGCACCTTAAGGGAGTTCATACCTTCAGCAAAAGAATTGATAAGTCGGGATGAAACAGATGAATCTTTTATCACTGCTGAACTAAAAGAAAATAAGAAGTTGGAGATAGGTGCTGAAGGGAAACACACAGCACAGAGTAATGGCACAAGTAAAGCTTCTAAGATGGATGATTCTGATGCTTCTCATGCAAAATCGGTTCATTGTAAGAAAACAGATGATCTCAATTGTGCTTTGACAATAGAAGGGATGCAAGGAAATCAGAACTACCCAAGACATGTTCCTGTGCATGTTGTTGATGGGAAACTTGGAACAGGTACTCAAAATCCGTCCCACGATATGTTGTTTCCAGAATCTGTATTTCAGCCTATGGGTGGGGTTAACAGGCAGCCTAATATTTTCACAAATGCATCTGCATCTGCATCTGCATCAAATGCAAGTGAAAGTCAAAATAACCCGGCACAATCTTCAGTTCATCAATCTTTTCCTGCTTATCCTCCTCCGTTCCCGCAAATTCACCAGAATGAAGATCACTACCAATCGTTTCTTCAAATGGCCTCCACATTTTCAAGTCTTATTGTCTCCACCCTGCTTCAAAACCCTGCAGCACATGCTGCAGCAAGCTTTGCTGCTACGTTTTGGCCCTATGCGAATATAGAAACTTCTGCAGATTCTCCAGCATGCCTGCAAGGAGCCTTTCCATCTAGGCAAATTGGCTCTCCCCCAAGTATGGCAGCTATTGCAGCTGCTACTGTGGCTGCTGCAACTGCATGGTGGGCAGCCCATGGCTTTCTTCCTTTGTGTGCCCCCTTCCATTCGGCTTTTCCTTACCCTCCGGCATCAGCCGCAGCAGTTCCATCAATGGATAATGGTGAAATGCCATCAGCGGCCAAAACAGAGCAAGGTGGTGAAACTGCTCCCCAGACTCCTCTGCAAGATCAGGATCCGGAATACACACATACTCTGCAAGCTCAACAATCAGCTTCTAAGTCACCAGCTGTTTCTTCATCAGAGCCAGAGGAAAGTGGAGGAGCTAAGATGGATACTTCATCAAAGGCTACTGATCATGAGAAGAACAAAGCAAATACTGAGCACCTTGACCCTAACAAAATGAAAGGCAGAAAACAGGTTGACCGTTCCTCATGTGGTTCCAATACCACCTCCAGCAGCGAGGTAGAGACAGATGCATTAGAGAAGGATGAGAAAGGGAAAGATGAAGACAAAGAACCTGATGCAAACCCTTTAGCTATTGACTCCAGAAATCGTCGTTCTAGAAGTGCAGGCAGCCTTCCTGATTCTTGGAAGGAGGTCTCTGAAGAGGGGAGGCTGGCCTTTCAGGCTCTCTTCTCCAGGGAGGTGTTGCCACAGAGTTTTTCTCCTCCACATGACTTGACAAATCAGGATCATCGGACGGACAACATTGAGGATAACAATCATAATATGGATGATAAACTAGACAGTATCAACAGATGCGGTTCTGACTGTAGAGGAGTGGCGAAAAACCTGTTATTCCTCAAAAAACAACATGATGAGGAAGAGGTGCTGCTAACCATAGGGCTTGGACTAGGAAAGCTGAAGACTAGTCGAACAGGGTTCAAACCTTACAAGAGATGTTCAATGGAAGCCAAGGAAAACAGGGTTGGAACTAACAGCAACCAAGGTGAAGAGAAAAGTGCCAAGAAAATACGCTTGGAAGCGGAGGCTTCAACTTGA 2214 0.4521 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNKFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGIPIGQSIDIDIPPPRPKRKPSNPYPRKTSASAQTSHGGGKDGKLLVSVSSSHCKQALDLEKEPQPEEAPCSFVTSADKSSMSVPQRNPCTLREFIPSAKELISRDETDESFITAELKENKKLEIGAEGKHTAQSNGTSKASKMDDSDASHAKSVHCKKTDDLNCALTIEGMQGNQNYPRHVPVHVVDGKLGTGTQNPSHDMLFPESVFQPMGGVNRQPNIFTNASASASASNASESQNNPAQSSVHQSFPAYPPPFPQIHQNEDHYQSFLQMASTFSSLIVSTLLQNPAAHAAASFAATFWPYANIETSADSPACLQGAFPSRQIGSPPSMAAIAAATVAAATAWWAAHGFLPLCAPFHSAFPYPPASAAAVPSMDNGEMPSAAKTEQGGETAPQTPLQDQDPEYTHTLQAQQSASKSPAVSSSEPEESGGAKMDTSSKATDHEKNKANTEHLDPNKMKGRKQVDRSSCGSNTTSSSEVETDALEKDEKGKDEDKEPDANPLAIDSRNRRSRSAGSLPDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLTNQDHRTDNIEDNNHNMDDKLDSINRCGSDCRGVAKNLLFLKKQHDEEEVLLTIGLGLGKLKTSRTGFKPYKRCSMEAKENRVGTNSNQGEEKSAKKIRLEAEAST 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0394 737 MobiDBLite consensus disorder prediction 517 544 - -
Alju11g0394 737 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 623 646 - -
Alju11g0394 737 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Alju11g0394 737 PANTHER SWI/SNF COMPLEX-RELATED 7 581 - -
Alju11g0394 737 Gene3D - 26 73 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 305 337 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 632 646 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 468 516 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 85 125 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 709 737 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 203 235 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 305 329 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 453 603 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 560 585 - -
Alju11g0394 737 MobiDBLite consensus disorder prediction 723 737 - -
Alju11g0394 737 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Alju11g0394 737 CDD SANT 26 69 IPR001005 -
Alju11g0394 737 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Alju11g0394 737 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Alju11g0394 737 MobiDBLite consensus disorder prediction 545 559 - -
Alju11g0394 737 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Alju11g0394 737 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Alju11g0394 737 SMART sant 23 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0394 Alju-ChrAlju11 4122522 4130835 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju11g0394 Myb_DNA-binding 3.2e-13 CL0123