Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0388 ATGGAGAGGCTTCAAGGACCCATCAATTCCTGTTTCGTTGGTGAATATTTGGGAGTGAACTCTCAATCGGATGAAGAAGAAGAGCTTTTGATATCACTATCGAGTTTGGAGGATAAAATGCCATTTCTTGAGATGCTTCAGAGTGTGGAATCTCAAACCCCACAATTTTTTCCCTTCAAAGATTCCAACTTTCAGTTTCAGACACTTGCAAACCAGAAGAAACCATGCGAAGAAGAGAGGGAAAGAACAACGTGTTTATCTAGAACAATGGAGACTCAAATTCACGCGCCGCCGGAGCTAGAGAGTTGCGTCACTCACGAGACGGTGGAGTTGCGGTCATCGCCGTCGCCGGCAAAGTCTGGGAACTGCAGGAGAAAAAGGAAGAGATCAACGAGACTAGTTAAGAGCAAGGAAGACGTGGAGAATCAACGCATGACCCACATTGCCGTCGAACGCAACCGCCGCCGTCAAATGAACGACCACCTTAGTGTTCTCAAATTACTCATGCCCCCTTCGTATATTCAAAAGGGGGACCAAGCGTCCATTATTGGAGGTGCAATAGATTTTGTGAAGGAATTGGAGCAGCTGCATCAATCTCTGGAAGCACAGAAAAGAATGAGAAGGAACGATGAGATTGGATTCAGCTATGGAACGACGTCGTGCGGAGGAGAAGGAGAATCAAACTTTGGGGAAGAAGTGAAAGCAGAGAACAAGTCAGATATAGCAGAAATAGAAGTAACTGTGATTCAAAACCATGTGAATCTGAAAGTTCAGTGCAAGAGAAGAAGTGGGCAGCTGGTGAAGACCATAATGGGTCTCGAGGATCTTAGGCTAACTATTCTGCACCTAAACATAACATCCTCACAGGCCTCGGTTCTTTACTGTTTCAATCTCAAGATAGAAGAAGAGTGTAAAGTAGTGGCAGCAAGTGAAATTGCAGGAGCAGTTCAAGAGATGTTGAGGTTCATCAATGGAAGCTAG 981 0.4506 MERLQGPINSCFVGEYLGVNSQSDEEEELLISLSSLEDKMPFLEMLQSVESQTPQFFPFKDSNFQFQTLANQKKPCEEERERTTCLSRTMETQIHAPPELESCVTHETVELRSSPSPAKSGNCRRKRKRSTRLVKSKEDVENQRMTHIAVERNRRRQMNDHLSVLKLLMPPSYIQKGDQASIIGGAIDFVKELEQLHQSLEAQKRMRRNDEIGFSYGTTSCGGEGESNFGEEVKAENKSDIAEIEVTVIQNHVNLKVQCKRRSGQLVKTIMGLEDLRLTILHLNITSSQASVLYCFNLKIEEECKVVAASEIAGAVQEMLRFINGS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0388 326 Gene3D - 139 212 IPR036638 GO:0046983
Alju11g0388 326 MobiDBLite consensus disorder prediction 109 141 - -
Alju11g0388 326 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 211 IPR036638 GO:0046983
Alju11g0388 326 CDD bHLH_AtFAMA_like 145 218 - -
Alju11g0388 326 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 193 IPR011598 GO:0046983
Alju11g0388 326 Coils Coil 190 210 - -
Alju11g0388 326 Pfam Helix-loop-helix DNA-binding domain 143 194 IPR011598 GO:0046983
Alju11g0388 326 PANTHER MAX DIMERIZATION, MAD 89 323 - -
Alju11g0388 326 SMART finulus 148 199 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0388 Alju-ChrAlju11 4076917 4078825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0388 31 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 44.231 5.40e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju11g0388 HLH 5.5e-10 No_clan