Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0380 ATGCAGGAACAGGAACTAGGAGGCAAAGAAGCAAACACTCCCAGATTTCTCACTGCAGCCGGCCGCGAGGAAGTTGTTGGCAACAAACTCTCCCGTCTTTCTTTCTCGATTGTAACAATGTCGATTGGAGAGATTGCTTCCTCTCTAGCTGTTGTGCTTCTTTACGACGATGGCATCCCAATCACTGCTGAGAAGATCTCAACGGTGTTGAAGGCAGCAAAAGTTGAGATTGAATCTTATTGGCCAAGTTTATTTGCTAAGCTTGCTGAGAAGAGAAACATTGAGGATCTGATCTTGAATTCTGGAGGTGGTGGGGCTCCCGTTGCTGTTGCTGCAGCTCCAGCTGCCGCTGGTGGTGGAGCTGCTCCTGCTGCGGCTCCTGCTGCTGAGGAGAAGAAGGAAGAACCCCAAGAAGAGAGTGATGGTGACATGGGCTTCAGCTTGTTTGATTAG 453 0.4967 MQEQELGGKEANTPRFLTAAGREEVVGNKLSRLSFSIVTMSIGEIASSLAVVLLYDDGIPITAEKISTVLKAAKVEIESYWPSLFAKLAEKRNIEDLILNSGGGGAPVAVAAAPAAAGGGAAPAAAPAAEEKKEEPQEESDGDMGFSLFD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0380 150 Pfam 60s Acidic ribosomal protein 61 149 - -
Alju11g0380 150 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 40 150 - -
Alju11g0380 150 FunFam 60S acidic ribosomal protein P1 39 102 - -
Alju11g0380 150 CDD Ribosomal_P1 44 100 - -
Alju11g0380 150 Gene3D - 40 102 IPR038716 -
Alju11g0380 150 Hamap 50S ribosomal protein L12 [rpl12]. 45 150 IPR027534 GO:0003735|GO:0005840|GO:0006414
Alju11g0380 150 MobiDBLite consensus disorder prediction 119 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0380 Alju-ChrAlju11 4020356 4022898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0380 41 150 Cytoplasmic Ribosomal Protein Gene Family AT1G01100 62.727 6.08e-33 111