Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0375 ATGGGGAAGAAGGGAGGAACCTCCTGGTTGACCGCTGTGAAAAGGGCATTTAGATCTCCCACCAAAGACACTGACAAAAGGAACCAGGAAGAAGACGACGACAAGAAGAGAGAAAAGCGACGATGGATTTTCAGAAAAACACCGAATCAGGACGCAGCGGTGAGTATCCAGCACACTCCGACAAGGCAGAACTCCGATTCGGCTGCTACAACTGCCGGTCGTGTACCTGTGCCGACGGCGACGGCGCCGGTGACAGATCAGAACAATGCGCTTGCCGCGGCGGTGGTGAAGGCTGAAGCGGCGATGGTCACCGCTCAGGCGGCGGTGGAAGCTGCAAGATTGAAGAGGCCTTCGAATCAAGCTAGGGAGAACTATGCTGCTACGGTTATTCAAACTGCTTTCAGAGGATACCTTGCAAGGAGGGCTCTTCGAGCGCTTAAAGGGTTGGTGAAATTGCAAGCTTTGGTGAGAGGTCATAATGTTCGGAAGCAAGCAAAAATGACCCTTCGGTGCATGCAGGCTCTGGTTCGAGTACAAGCCAGAGTGCTTGACCAACGATCGAGGGTCTCACATGAGACCAGTAGTAGAAAATCCATATTCAGTGACACTAACAGCGTTTGGGAGTCTCGGTATCTTCAGGATATTTCAGATAGGAGATCAATGTCAAGAGGAGGGAGCAGTATTGCAGACGACTGGGATGAACGCCCACACACAGTTGAAGAAGTTAAAGCCATGTTGCAGCAGAGGAAAGAAGCTGCAGCTATGAAGCGTGACAAGTCATTATCTCAAGCTTTTTCGCAACAGCTTTCGAGAAATAGTTGGAACTCATCGATTGGAAATGAAGATGAACTGGAAGAGAGACCGAAATGGCTGGACCGGTGGATGGCTTCAAAGCCATGGGAGACCAGAGGAAGAGCTTCGACTGATCAGAGAGACACCATTAAAACTGTAGAAATTGACACTTCTCAACCATACTCGTATCTGGGATCTAACTACAGAAGATCACATCCAAATTATCAATACAACCCACACCAACCCCAGAGACATTCTGTGGCTTCCCCACTCCACAGAAGCGACCAAAATAGTTCTATTCATCAATCTCCTGCAACCCCATCTCCTGCAAAATCAAGGCCTATTCAAATCCGGTCGGCGAGCCCTCGATGTGGTAGGGAAGATAGAAGCTTCCATACATCTCAAACCCCAAGTTTGAGGTCCAATTACCATTATGCTGGAAGCCTGTACCCAAATGGAAGGGTTGGAACAAGTATCAGTGGTGGGGGTACATTGCCTAATTACATGGCGGCAACTGAGTCTGCGAAGGCACGAGTTCGGTCTCAGAGTGCACCGAGGCAGAGGCCATCGACGCCGGAGAGGGACAGGGCGGGATCTGTAGCTAAGAAGAGGCTTTCATTCCCTAATGCTCCAGACCCTTATGGTGCTGCAATGGGTTATGGAAATTATGGGCACAGTTTAAAAAGTCCAAGCTTCAAAAGCGTGAGTGGTTCACACTTTGGGTTGGAGCAGCAATCCAACTATTCTTCTTGCTACACTGAGAGTCTTGGTGGCGAGATTTCTCCGTCTTCAACCGGTGATCTTAGAAGGTGGTTGAGATGA 1614 0.4944 MGKKGGTSWLTAVKRAFRSPTKDTDKRNQEEDDDKKREKRRWIFRKTPNQDAAVSIQHTPTRQNSDSAATTAGRVPVPTATAPVTDQNNALAAAVVKAEAAMVTAQAAVEAARLKRPSNQARENYAATVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRSRVSHETSSRKSIFSDTNSVWESRYLQDISDRRSMSRGGSSIADDWDERPHTVEEVKAMLQQRKEAAAMKRDKSLSQAFSQQLSRNSWNSSIGNEDELEERPKWLDRWMASKPWETRGRASTDQRDTIKTVEIDTSQPYSYLGSNYRRSHPNYQYNPHQPQRHSVASPLHRSDQNSSIHQSPATPSPAKSRPIQIRSASPRCGREDRSFHTSQTPSLRSNYHYAGSLYPNGRVGTSISGGGTLPNYMAATESAKARVRSQSAPRQRPSTPERDRAGSVAKKRLSFPNAPDPYGAAMGYGNYGHSLKSPSFKSVSGSHFGLEQQSNYSSCYTESLGGEISPSSTGDLRRWLR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0375 537 PANTHER IQ-DOMAIN 5-RELATED 1 473 - -
Alju11g0375 537 MobiDBLite consensus disorder prediction 317 379 - -
Alju11g0375 537 SMART iq_5 145 166 IPR000048 GO:0005515
Alju11g0375 537 SMART iq_5 122 144 IPR000048 GO:0005515
Alju11g0375 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 168 IPR027417 -
Alju11g0375 537 MobiDBLite consensus disorder prediction 258 282 - -
Alju11g0375 537 MobiDBLite consensus disorder prediction 1 73 - -
Alju11g0375 537 MobiDBLite consensus disorder prediction 436 472 - -
Alju11g0375 537 MobiDBLite consensus disorder prediction 300 316 - -
Alju11g0375 537 Pfam Protein of unknown function (DUF4005) 385 486 IPR025064 -
Alju11g0375 537 MobiDBLite consensus disorder prediction 515 537 - -
Alju11g0375 537 MobiDBLite consensus disorder prediction 18 46 - -
Alju11g0375 537 MobiDBLite consensus disorder prediction 50 73 - -
Alju11g0375 537 MobiDBLite consensus disorder prediction 260 279 - -
Alju11g0375 537 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
Alju11g0375 537 FunFam IQ-domain 11 122 173 - -
Alju11g0375 537 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
Alju11g0375 537 MobiDBLite consensus disorder prediction 300 406 - -
Alju11g0375 537 Pfam IQ calmodulin-binding motif 126 144 IPR000048 GO:0005515
Alju11g0375 537 Pfam IQ calmodulin-binding motif 150 166 IPR000048 GO:0005515
Alju11g0375 537 Gene3D - 120 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0375 Alju-ChrAlju11 3870288 3872418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0375 9 537 IQD Protein Family AT4G00820 56.863 3.94e-179 513