Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0342 ATGATGGTTTACAAATCAGTTTGGTTCGTTCTTCTTTTAGTATTGATTTTTCTTGCCTTCTTTTTCCTTCGGGTGATTCTGTTCAAAACTGGATTCATCTATACTCTGAAGAAACTATGGAGAATCGTCGAGGACTACTTTCATGTTTACCAGTTCTTCAAAGTTCCAGAGCTCAACGAGAGCTTGAAGGAGAATCAGCTTTACAAGAAGGTCTCTCTCTATCTGCATTCTCTGCCTTCTCTTGAAGACTCTGATTTCACCAACCTCGTCAGTTCCTCAGGGAAGAACCAGAACGACATCGTTCTCCACCTCGACCCCAAACAAACCATCGGCGATGAATTTCTCGGAGCTAGAGTGTTCTGGTTCCACGAAGCAGAACAGACTTCTGATTTGAAAAACAGAACGTTCGTGCTGAAAATCAGGAAAGCCGACAAGAGAAGAATTCTCCGGCCTTATCTCCAGCACATCCACACCATTGCCGATGAAAGGGAGCAGCAAGGAAAACGTGATTTGAAGATGTACATGAATGCTGGTGCACAATCCATAGGCGGCGACGGGAATGTCCGGTGGAGATCCGTTCCGTTCACGCATCCATCAACCCTGGATACAATCGCCATGGAAACAGATCTGAAGAACAAGATAAAATCCGACCTCGAATCTTTCCTCAAAGCTAAACAGTATTACCAACGATTGGGTCGGGTATGGAAACGGAGCTTCCTTTTGTACGGACCATCCGGCACCGGAAAATCGAGCTTCGTCGCTGCCTTGGCCAATTTCCTTAATTACGACGTTTACGACATCAACCTTTCAAACGTCACTGGAGATTCCGATCTGAAGCTCCTCCTGCTGGAAACGACGCCGAAATCGGTCATAGTAATCGAAGACCTCGATCGGTTCCTGATGGAGAAGAAATCAACGGGCGTAAGTTTGTCAGGAGTACTGAACTTCATGGACGGGATCTTGAACTCGTGCTGCGCAGAGGAGAAAATAATGGTTTTCACGATGACCAGTAAGGATCAAATCGACCCGAACCTACTTCGACCGAGTCGGGTCGACGTCCATATCTATTTCCCGCTTTGTGATTTTGCATCGTTCAAGACGCTCGCGAGTAACTATCTCGGTGTGAAGGACCACAAGCTGTTCCCGCAGGTCCAAGAGATTTTTGAAAACGGTGCGAGTTTGAGCCCTGCCGAGATAGGCGAGTTAATGATCGCGAATCGGACCTCACCGAGTCGGGCTATCAAGTCGGTTATCAGCGCGCTGCAAACGGACGGCGATGGGAGAGGAAGCGGGAGGATCGGGCAGCGGTCGGGGGTGAGCAACGACGCCGAGGAAGTGGGAGAACGTAGTGCCAAGTCTCCGTATAACGACGGCCTCTCGACGGTGAAGGATTTACGGAAACTGTATGGTTTGTTCAGAGTGAAGAGCAACGCGAAATCTCAGTCGTTCGATGGGGGAGTGAGTCCGAGGTCAGAGCGATTGTAA 1485 0.4869 MMVYKSVWFVLLLVLIFLAFFFLRVILFKTGFIYTLKKLWRIVEDYFHVYQFFKVPELNESLKENQLYKKVSLYLHSLPSLEDSDFTNLVSSSGKNQNDIVLHLDPKQTIGDEFLGARVFWFHEAEQTSDLKNRTFVLKIRKADKRRILRPYLQHIHTIADEREQQGKRDLKMYMNAGAQSIGGDGNVRWRSVPFTHPSTLDTIAMETDLKNKIKSDLESFLKAKQYYQRLGRVWKRSFLLYGPSGTGKSSFVAALANFLNYDVYDINLSNVTGDSDLKLLLLETTPKSVIVIEDLDRFLMEKKSTGVSLSGVLNFMDGILNSCCAEEKIMVFTMTSKDQIDPNLLRPSRVDVHIYFPLCDFASFKTLASNYLGVKDHKLFPQVQEIFENGASLSPAEIGELMIANRTSPSRAIKSVISALQTDGDGRGSGRIGQRSGVSNDAEEVGERSAKSPYNDGLSTVKDLRKLYGLFRVKSNAKSQSFDGGVSPRSERL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0342 494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 419 IPR027417 -
Alju11g0342 494 Gene3D - 187 356 IPR027417 -
Alju11g0342 494 Gene3D - 357 418 - -
Alju11g0342 494 MobiDBLite consensus disorder prediction 423 458 - -
Alju11g0342 494 SMART AAA_5 235 361 IPR003593 GO:0016887
Alju11g0342 494 PANTHER BCS1 AAA-TYPE ATPASE 42 422 - -
Alju11g0342 494 Pfam Domain associated at C-terminal with AAA 36 123 IPR025753 -
Alju11g0342 494 Pfam ATPase family associated with various cellular activities (AAA) 240 359 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0342 Alju-ChrAlju11 3368485 3369969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0342 231 355 Calmodulin-binding Proteins AT3G56690 31.429 8.42e-09 56.2