Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0335 ATGCCTACAAGTCACCTTCTTTTTCCAATTTCGTGGGTGGTCCAGTACCAGATGAAAACTTCAATGGAAGACAAACCATTCCCTGCATGGTCATGGTCTGTTGAACAATGCTTGAAAGAATACAGTGTTAAACCCGAAAAGGGTTTGAACACCTACGAGGTAGAGAAGCGGCGCGAGAGATATGGTTGGAATGAGTTAGCGAAAGAGAAGGGGAGGCCCTTATGGCAACTAGTATTAGAGCAATTCGATGACATGCTTGTGAAGATTCTTCTGGTTGCAGCTTTTATATCATTCATTCTTGCTTATTTGCATGGGAATGAATCAGGGGAATCTGGATTTGAAGCTTATGTGGAGCCACTTGTGATCATTCTGATCTTAGTACTTAATGCCATTGTTGGAGTTTGGCAAGAGAACAACGCTGAGAAGGCACTTGATGCTCTCAAAGAGTTGCAATGTGAATCTGGAAAAGTGTTAAGAGATGGGAATTTTGTGCCTGATTTGCCTGCAAGGGAGCTTGTTCCTGGTGATATTGTGGAATTACGTGTAGGAGATAAAGTTCCTGCTGATATGAGAGTTGCAGCTTTGAAAACCTCAACACTGAGAGTTGAACAAAGCTCACTAACTGGAGAAGCAATGCCTGTTTTGAAAGGAACAAATCCAATTTTCATGGATGATTGTGAGTTGCAGGCCAAAGAAAACATGGTTTTTGCAGGCACCACTGTTGTTAATGGGAGTTGTATCTGTATTGTTGTCACCACTGGGATGAACACTGAAATTGGGAAGATACAGAAGCAAATTCATGAAGCTTCTTTGGAGGATAGTGACACCCCATTAAAGAAGAAGCTAGATGAGTTTGGTGGGCAGCTTACAACTGCAATTGGGTTGGTTTGCCTTGTTGTGTGGGTTATAAACTACAAAAATTTCCTTTCATGGGAGCTTGTAGATGGATGGCCTTCAAACATCAAATTTTCCTTTGAGAAGTGTACTTATTATTTTAAAATTGCTGTTGCCCTGGCTGTAGCTGCAATCCCTGAAGGCCTTCCCACTGTTATTACAACTTGTTTGGCCCTTGGCACGAGGAAAATGGCGCAAAAGAATGCGATTGTACGAAAGCTTCCTAGTGTAGAAACTCTTGGATGCACAACTGTTATTTGTTCAGATAAAACTGGTACTTTGACAACAAATCAGATGTCTGTGACAGAGTTCTTCACTTTGGGAGGGAAAACTACTGCTTCTCGAGTCATCCGTGTTGAAGGCTCAACTTATGATCCTAGAGATGGAGGAATTGTGGATTGGACTTGCTATAACATGGATGCAAACTTGCAGGCCATGGCAGAAATATGTGCCATTTGTAATGATGCTGGCATTCATTTTGATGGTCGCCTTTTCCGGGCTACCGGTTTGCCCACTGAAGCGGGTCTCAAGGTTTTGGTTGAAAAGATGGGAATTCCAGATAACAAGGCAAGGAACAGAATTCGAGATACGGAAGTTGCTGCAAGCCACTTGATTGATGGCAACACTGTTAAGTTAGGAAGTTGTGAGTGGTGGACAAGAAGATCCAAAAGAGTTGCCACATTGGAGTTTGATCGAATTAGGAAGTCAATGAGTGTTATTGTTCGTGAACCAACCGGGCGAAACCGGCTTCTGGTTAAGGGAGCTGTTGAGAGCTTACTTGAACGTAGTTCACATGTGCAACTAGCTGATGGATCTCTGGTTCCAATTGATGAGCACTGTAGGAAACTACTGTTTTCAAGACTCCTGGAGATGAGTTCAAAAGGATTGAGGTGCTTGGGTTTGGCATATAAGGATGACTTGGGTGAATTTTCGGACTATTATGCTCAAAATCATCCTGCTCACAAGAAATTGCTTGATCCTACTTGCTACTCATCCATTGAAAGTGATCTAGTATTTGTTGGTGTTGTTGGTCTAAGAGATCCTCCTCGTGAGGAAGTTCATAGGGCGATTGATGATTGCAAGGAAGCTGGGATTAGAGTCATGGTGATAACCGGAGATAACAAGTCCACGGCAGAAGCTATTTGTCGGGAAATTAATCTGTTTTCCAGAGATGAGGATCTTACAGAGAGAAGTCTGACAGGCAAGGAGTTTATGTCTCTTTCTCCTTCAGAACAAGTTAAAATGTTGTCAAAACCAGGAAGCAAAGTATTCTCTCGAGCCGAGCCTAGGCACAAGCAAGAGATTGTGAGGTTACTGAAGGATATGGGAGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCTCCTGCTCTTAAACTTGCTGACATAGGGATTGCCATGGGCATAACTGGAACTGAGGTTGCAAAAGAAGCTTCGGATATGGTGCTTGCAGATGACAACTTCAGTACCATTGTTTCAGCTGTTTCTGAAGGTCGCTCTATTTTCAATAACATGAAAGCCTTTATTAGGTACATGATATCATCCAATGTTGGAGAAGTGATATCTATTTTCTTGACTGCTGCCCTGGGAATCCCAGAATGTATGATACCTGTGCAACTTCTGTGGGTGAATTTGGTTACTGATGGTCCTCCTGCAACAGCTCTGGGATTTAACCCAACTGATGTTGATATAATGCGAAAGCCGCCTCGTAAAACTGATGAACCTCTCATCAGTTCATGGCTTCTTTTCCGTTATCTGGTAATTGGATCCTATGTAGGGATTGCAACAGTGGGAATTTTTGTCTTGTGGTACACGCAAGCATCTTTTCTGGGCATCAATCTGGCAAGTGACGGGCATACAATCATAGAATTTTCGCAGCTTCGCAACTGGGGAGAGTGTCGTTCGTGGTCAAATTTCACTGCATCTCCATTTGAAGTAAGTGGGGGTCGCCTGATTACATTCTCAAATCCATGTGGTTACTTTTCAGTTGGCAAAGTGAAGGCCATGACTCTGTCCCTCTCAGTCTTAGTGGCAATTGAGATGTTTAACTCTTTCAATGCTTTATCTGAAGAGAACAGCTTGTATGAAATGCCCCCATGGAGGAATCCTTGGCTCTTGGTAGCCACAACAGTATCACTAGGACTTCATTGCCTCATCCTCTATGTTCCATTCCTTGCAGAAGTGTTTGGTGTTGTTCCACTAAGTCTCAAAGAATGGTTTTTGGTCATACTAGTTTCTTTACCTGTAATTTTTGTTGATGAGGTTTTGAAATTAGTGGCAAGGAGGAGTAGGGCAGTGAGAAAGGAGAAAACAGCATGA 3216 0.4275 MPTSHLLFPISWVVQYQMKTSMEDKPFPAWSWSVEQCLKEYSVKPEKGLNTYEVEKRRERYGWNELAKEKGRPLWQLVLEQFDDMLVKILLVAAFISFILAYLHGNESGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALDALKELQCESGKVLRDGNFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTNPIFMDDCELQAKENMVFAGTTVVNGSCICIVVTTGMNTEIGKIQKQIHEASLEDSDTPLKKKLDEFGGQLTTAIGLVCLVVWVINYKNFLSWELVDGWPSNIKFSFEKCTYYFKIAVALAVAAIPEGLPTVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGGKTTASRVIRVEGSTYDPRDGGIVDWTCYNMDANLQAMAEICAICNDAGIHFDGRLFRATGLPTEAGLKVLVEKMGIPDNKARNRIRDTEVAASHLIDGNTVKLGSCEWWTRRSKRVATLEFDRIRKSMSVIVREPTGRNRLLVKGAVESLLERSSHVQLADGSLVPIDEHCRKLLFSRLLEMSSKGLRCLGLAYKDDLGEFSDYYAQNHPAHKKLLDPTCYSSIESDLVFVGVVGLRDPPREEVHRAIDDCKEAGIRVMVITGDNKSTAEAICREINLFSRDEDLTERSLTGKEFMSLSPSEQVKMLSKPGSKVFSRAEPRHKQEIVRLLKDMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVSEGRSIFNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPTDVDIMRKPPRKTDEPLISSWLLFRYLVIGSYVGIATVGIFVLWYTQASFLGINLASDGHTIIEFSQLRNWGECRSWSNFTASPFEVSGGRLITFSNPCGYFSVGKVKAMTLSLSVLVAIEMFNSFNALSEENSLYEMPPWRNPWLLVATTVSLGLHCLILYVPFLAEVFGVVPLSLKEWFLVILVSLPVIFVDEVLKLVARRSRAVRKEKTA 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0335 1071 Gene3D - 80 1060 - -
Alju11g0335 1071 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 811 1065 - -
Alju11g0335 1071 Pfam Cation transporter/ATPase, N-terminus 30 97 IPR004014 -
Alju11g0335 1071 FunFam Calcium-transporting ATPase, putative 132 267 - -
Alju11g0335 1071 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 395 646 - -
Alju11g0335 1071 FunFam Calcium-transporting P-type ATPase, putative 641 792 - -
Alju11g0335 1071 FunFam Calcium-transporting ATPase, putative 231 381 - -
Alju11g0335 1071 NCBIfam HAD-IC family P-type ATPase 720 831 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju11g0335 1071 NCBIfam HAD-IC family P-type ATPase 323 410 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju11g0335 1071 Gene3D - 382 792 IPR023214 -
Alju11g0335 1071 Pfam haloacid dehalogenase-like hydrolase 382 761 - -
Alju11g0335 1071 PRINTS P-type cation-transporting ATPase superfamily signature 771 783 - -
Alju11g0335 1071 PRINTS P-type cation-transporting ATPase superfamily signature 661 671 - -
Alju11g0335 1071 PRINTS P-type cation-transporting ATPase superfamily signature 203 217 - -
Alju11g0335 1071 PRINTS P-type cation-transporting ATPase superfamily signature 747 766 - -
Alju11g0335 1071 PRINTS P-type cation-transporting ATPase superfamily signature 639 650 - -
Alju11g0335 1071 PRINTS P-type cation-transporting ATPase superfamily signature 385 399 - -
Alju11g0335 1071 PRINTS Sodium/potassium-transporting ATPase signature 1000 1024 - -
Alju11g0335 1071 PRINTS Sodium/potassium-transporting ATPase signature 378 399 - -
Alju11g0335 1071 Gene3D - 47 269 - -
Alju11g0335 1071 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 392 643 IPR023299 GO:0000166
Alju11g0335 1071 Pfam E1-E2 ATPase 151 365 - -
Alju11g0335 1071 ProSitePatterns E1-E2 ATPases phosphorylation site. 387 393 IPR018303 -
Alju11g0335 1071 SMART Cation_ATPase_N_a_2 28 102 IPR004014 -
Alju11g0335 1071 SUPERFAMILY HAD-like 383 851 IPR036412 -
Alju11g0335 1071 SUPERFAMILY Calcium ATPase, transmembrane domain M 28 1061 IPR023298 -
Alju11g0335 1071 SUPERFAMILY Calcium ATPase, transduction domain A 157 265 IPR008250 -
Alju11g0335 1071 Pfam Cation transporting ATPase, C-terminus 832 1058 IPR006068 -
Alju11g0335 1071 SFLD p-type atpase 366 799 IPR044492 -
Alju11g0335 1071 Gene3D - 395 646 IPR023299 GO:0000166
Alju11g0335 1071 SFLD Haloacid Dehalogenase 366 799 - -
Alju11g0335 1071 PANTHER CALCIUM-TRANSPORTING ATPASE 34 1064 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0335 Alju-ChrAlju11 3328152 3333178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0335 23 1070 Primary Pumps ATPases(2) AT4G00900 77.704 0.0 1686