Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju11g0334 | ATGTGCTCTACGTTTAGTGTTTACTTACAGTTGAATGAAGTTCGATGGGAGAAAGAACGATCATCATCCCGTCGTCGCGCTGGGATCTCTATAATCCGGAGCTTTACACGAAGGGAAACAAATTCGAGATTTTTCAGGCTGCTTGGGGGAATAGTTGCGAAGATGAGGCCGGTTTTTGTTGGGAACTTCGAGTACGATACCCGTCAATCTGAGCTGGAACGCTTGTTCGCTAAGTATGGGAGGATAGAACGCGTTGACATGAAATCGGGTTTTGCATTTGTGTATTATGAGGATGAGCGTGATGCTGAAGATGCAATCCGTGCATTAGACAATTTTCCATTTGGTCATGACAAGCGAAGGCTGTCTGTAGAGTGGGCTAGGGGTGAACGTGGCCGTCATCGAGATGGGTCCAGAGCAAACCAGAGGCCCACAAAAACATTATTTGTGATTAACTTTGATCCAATTCGCACTAGAATTCGTGATATAGAAAGGCACTTTGAACCATATGGGAAAGTTCTTCATGTTCGGATTCGTCGGAATTTTGCATTTGTGCAGTTTGAATCACAAGAAGATGCCACTAAAGCTCTTGAGTGCACACATATGAGCAAGATACTGGATAGGGTGGTTTCAGTGGAGTATGCTCTGAGGGATGATGATGAGAGGGGTGACAGATACTTTGACAGCCCCAGAAGAGGTGGGGGTTATGGAAGATCACCCAGTCCAGTTCCTCGGAGGCGACCTAGTCCTGATTATGGTCGTCCACGCAGCCCTGTGTATGATAGGTACAATGGACCAGCGTATGACAGACGTAGGAGTCCTGATTATGGCAGGCCTAGGAGTCCCGATTATGGCAGGGCGAGGAGTCCTGAATATGGCAGATACCGCAGCCGCTCACCAATCAGAAGGTCCAGGACTTGA | 918 | 0.476 | MCSTFSVYLQLNEVRWEKERSSSRRRAGISIIRSFTRRETNSRFFRLLGGIVAKMRPVFVGNFEYDTRQSELERLFAKYGRIERVDMKSGFAFVYYEDERDAEDAIRALDNFPFGHDKRRLSVEWARGERGRHRDGSRANQRPTKTLFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQFESQEDATKALECTHMSKILDRVVSVEYALRDDDERGDRYFDSPRRGGGYGRSPSPVPRRRPSPDYGRPRSPVYDRYNGPAYDRRRSPDYGRPRSPDYGRARSPEYGRYRSRSPIRRSRT | 305 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju11g0334 | 305 | FunFam | Serine/arginine-rich splicing factor RS31 | 55 | 138 | - | - | |
Alju11g0334 | 305 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 145 | 216 | IPR000504 | GO:0003723 | |
Alju11g0334 | 305 | SMART | rrm1_1 | 57 | 124 | IPR000504 | GO:0003723 | |
Alju11g0334 | 305 | SMART | rrm1_1 | 146 | 212 | IPR000504 | GO:0003723 | |
Alju11g0334 | 305 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 147 | 209 | IPR000504 | GO:0003723 | |
Alju11g0334 | 305 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 58 | 115 | IPR000504 | GO:0003723 | |
Alju11g0334 | 305 | Gene3D | - | 139 | 225 | IPR012677 | - | |
Alju11g0334 | 305 | Gene3D | - | 53 | 138 | IPR012677 | - | |
Alju11g0334 | 305 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 56 | 128 | IPR000504 | GO:0003723 | |
Alju11g0334 | 305 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 145 | 297 | - | - | |
Alju11g0334 | 305 | FunFam | Serine/arginine-rich splicing factor RS31 | 139 | 227 | - | - | |
Alju11g0334 | 305 | SUPERFAMILY | RNA-binding domain, RBD | 56 | 220 | IPR035979 | GO:0003676 | |
Alju11g0334 | 305 | CDD | RRM2_AtRSp31_like | 146 | 215 | - | - | |
Alju11g0334 | 305 | MobiDBLite | consensus disorder prediction | 264 | 297 | - | - | |
Alju11g0334 | 305 | MobiDBLite | consensus disorder prediction | 221 | 305 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju11g0334 | Alju-ChrAlju11 | 3315202 | 3320742 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju11g0334 | 54 | 284 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 27.444 | 1.67e-09 | 56.6 |