Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0322 ATGGGAAGAGCTCCATGTTGTGCTAAAGTAGGGTTACACAGAGGTCCGTGGACTCCTAAAGAAGATGTATTGCTCACTAAGTATATTCAAGCTCATGGCGAGGGTCAATGGAAATCTCTTCCTAAAAAAGCTGGGCTTCTGAGATGTGGGAAAAGTTGCAGACTGAGATGGATGAACTATCTGAGACCAGACATAAAGAGAGGCAACGTAACAGCTGAAGAAGACGACCTCATCATCAGAATGCATGCTCTGATCGGAAACCGGTGGTCTCTCATCGCCGGCCGATTACCAGGACGAACCGATAACGAAATCAAGAACTACTGGAACACTCATCTCAGCAAAAGAGTCAAAGCACAACAATCCAGGCCTGATGATCACCAACCATTAAGAGATAACACCGACGATAAGGCCAAGAATGAGATCATTAAGAAGAAGAAAAAGCCCGCGAAAAATAAGAGTAAGAATAAATCCAACAGTGTCAACGAAGAAGCAGAGAAGAAGACCAATATATATCTGCCAAAACCAATTAGGGTTAGGGCTTTACATATAAGTGGTGGAAACGAAGAATATTCCAAGAACGGTTCTTCTTCAGCAAGTGGATCTTCAAGCCAACAAGAGTTATTATCACAGAAGGAAGATGTGGATAATTATGTAAAGAGTTGTGAGCCCTGGGTTGGTGAAAATAGTGTGTTTGGGTTTTTTGTGGAAGAAGATCAGAATATTGACCGAGTCAACGGCTCAGTTTCAGAAGAAAATATTAATAATATTATTAATATTAATAATAATATTATTAATGATATGGAATGCGAGTCACTGGAGAGGTTATACGAGGAGTATTTGCAGCTCTTGAAGGATGATAATAATGTTGGTGATGAAAACCAAGGGCAAGTATTGGACTCTTTTGATCAGTCTTTATTTCTCTAA 924 0.4004 MGRAPCCAKVGLHRGPWTPKEDVLLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNVTAEEDDLIIRMHALIGNRWSLIAGRLPGRTDNEIKNYWNTHLSKRVKAQQSRPDDHQPLRDNTDDKAKNEIIKKKKKPAKNKSKNKSNSVNEEAEKKTNIYLPKPIRVRALHISGGNEEYSKNGSSSASGSSSQQELLSQKEDVDNYVKSCEPWVGENSVFGFFVEEDQNIDRVNGSVSEENINNIININNNIINDMECESLERLYEEYLQLLKDDNNVGDENQGQVLDSFDQSLFL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0322 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju11g0322 307 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju11g0322 307 SMART sant 66 114 IPR001005 -
Alju11g0322 307 SMART sant 13 63 IPR001005 -
Alju11g0322 307 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju11g0322 307 MobiDBLite consensus disorder prediction 187 211 - -
Alju11g0322 307 Gene3D - 14 66 - -
Alju11g0322 307 CDD SANT 16 61 IPR001005 -
Alju11g0322 307 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju11g0322 307 Pfam Myb-like DNA-binding domain 71 112 IPR001005 -
Alju11g0322 307 FunFam Myb transcription factor 11 67 - -
Alju11g0322 307 MobiDBLite consensus disorder prediction 188 211 - -
Alju11g0322 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju11g0322 307 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 221 - -
Alju11g0322 307 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju11g0322 307 CDD SANT 71 112 IPR001005 -
Alju11g0322 307 MobiDBLite consensus disorder prediction 115 166 - -
Alju11g0322 307 MobiDBLite consensus disorder prediction 117 142 - -
Alju11g0322 307 FunFam MYB transcription factor 68 129 - -
Alju11g0322 307 Gene3D - 71 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0322 Alju-ChrAlju11 3211272 3212763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0322 4 158 MYB Transcription Factor Family AT3G13540 58.710 8.73e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju11g0322 Myb_DNA-binding 1.4e-13 CL0123