Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0285 ATGACGCTGTCGTTTTCATTGGACGCTCTCTCACTTGAGAGAGAGAACATATTCGACTCTTGTCACAGCCTTGGCTCCTTCTCTGTCTCCTTCGTCTCTTTTATATCTGCATGTAGCTCTTTTGCTCTCTATCTGCATTCTCTCAGAAAGGGCGGGAAAGAAAAGCAGGGAAAAGATCATTCTGTAGGGATTAATATTCCCGCCATATTTAAGATTAGTTAGTTTGGTTATTGGAGTTCAAAGTCATCATCTCCCACTGAGCAGAAAAATTCTAGTGATAATGAATATCAGGGAAGAAAACTGAGACCAAGCGTAGGCGTTGTTTTAGATAATATCAAAAGAAGACTTGAGGATGTGTCTGATAAAATAAAAAACTTGAAAAAATCCTCAACTGTTCATCCTATAAGTGACAGACAGCCCAAGACATTAGCTCCTAGAAGAAAAATTCTTGACCCACAGTGGTCATTCCTTCAGAAATGGAACAAAATATTTGTAATCACATCTGTTATGGCTGTCTCTGTGGATCCACTGTTCTTCTATGTCCCAGCAATTGTAGATACAGACAAATGCCTTAAGTCGGATGGAAACTTGCCGATCATAGCTTCTGTTCTTCGCACATTCTTTGATCTTTTCTACATTCTTCACATTATCTTTCAGTTTCGAACTGGGTTTATTGCTCCATCTTCTCGTGCATTGGGAAGGGGCGAGCTGGTGAATGATCATCGGGCTATCATGGAAAGATACTTATCTTCATTCTTTATCATTGATGTTCTATCAATTGTTCCAGTTCCACAGGTGTTTGTTGTATTTATCATTCCAGAAATGAATGCCTCAGTTCCATTTGTGGCGAAGAACGTGTTGACATATGTGATCATGCCCATTATTCGAAGAAGTAACAAGAACTTCTGAATGCAAATTTTACTTCACTTCTCACTAATTCATGTGCTGTTGATCCTTCTCAAATTACCAATTCAACAATCTGGTGTGGTTGATTCAACAACAGATGTTCCTCAGGAGTTCTTCTACTTCTTCTGGTGGGGTTTGCGCAATTTAAGTACTTATGTGGGGGAGATAATCTTTGCTATCTGGATTGCCGTCTTTGGATTAGTTCTATTCTCTTTGCTTATTGGAAGCATGCAGGTTCCACTGTTTGAGAAAATGGATGAACAGTTGTTGGATGCAAGGTCTGATAGATTGAAGCCAGTTCTTTATACAGAGAAGAGTTGCATTGTTCGCGAAGGAGATCCGGCCTTGGACCCCAATTCGTCTTCAAATCTTCCTATTTCAACAAGAACAGTGGAATCCATATCAAAAGTTGAAGCTTTGGCTCTCATACCCGATGTCTTAAAGTTTGTTACTTCTCAGTTCCGTAGACTTCATAGCAAACAGCTTCAGCACACTTTCAGGCAAGGCTTGATAATACATCCTACGCATCATGGAGTTTACAGTGCGGAGATGCGACCGGAGCTGGTGGCTCCGGCGAAGCCCATTCCCCGCGAACTCAAGCCACTCTCCGACATAGACAGTCAAGAAGGTCTTCGTTTTCAAGTTCCTTTCATAATGTTATATTGTCATGACCCTTCAATGGAAGGAACAGACCCTGTGGGAATCATTAGAAAGGCACTCGCAGAAGCACTGGTGTATCACTACCCTTTGGCAGGAAGGCTGAGGGAAGGAGGTGATCGGAAACTCACGGTGGATTGTACGGCGGAAGGCGTCTTGTTCATAGAATAA 1734 0.417 MTLSFSLDALSLERENIFDSCHSLGSFSVSFVSFISACSSFALYLHSLRKGGKEKQGKDHSVGINIPAIFKISXFGYWSSKSSSPTEQKNSSDNEYQGRKLRPSVGVVLDNIKRRLEDVSDKIKNLKKSSTVHPISDRQPKTLAPRRKILDPQWSFLQKWNKIFVITSVMAVSVDPLFFYVPAIVDTDKCLKSDGNLPIIASVLRTFFDLFYILHIIFQFRTGFIAPSSRALGRGELVNDHRAIMERYLSSFFIIDVLSIVPVPQVFVVFIIPEMNASVPFVAKNVLTYVIMPIIRRSNKNFXMQILLHFSLIHVLLILLKLPIQQSGVVDSTTDVPQEFFYFFWWGLRNLSTYVGEIIFAIWIAVFGLVLFSLLIGSMQVPLFEKMDEQLLDARSDRLKPVLYTEKSCIVREGDPALDPNSSSNLPISTRTVESISKVEALALIPDVLKFVTSQFRRLHSKQLQHTFRQGLIIHPTHHGVYSAEMRPELVAPAKPIPRELKPLSDIDSQEGLRFQVPFIMLYCHDPSMEGTDPVGIIRKALAEALVYHYPLAGRLREGGDRKLTVDCTAEGVLFIE 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0285 577 Coils Coil 109 129 - -
Alju11g0285 577 SUPERFAMILY cAMP-binding domain-like 380 417 IPR018490 -
Alju11g0285 577 SUPERFAMILY Voltage-gated potassium channels 151 381 - -
Alju11g0285 577 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 326 381 - -
Alju11g0285 577 Gene3D - 485 577 IPR023213 -
Alju11g0285 577 Pfam Transferase family 487 577 - -
Alju11g0285 577 ProSiteProfiles cAMP/cGMP binding motif profile. 383 417 IPR000595 -
Alju11g0285 577 Gene3D Jelly Rolls 381 419 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0285 Alju-ChrAlju11 2835908 2841580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0285 379 469 Ion Channels AT5G53130 53.731 3.51e-31 127