Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0267 ATGGACAAATGTTGCAGAAAGCAAGAAAAGACTGAAATCTCTTACTCTGAAGGTCAAGTTCTATCTCTTTCTACCTCAGATTCATCCAATTATGGGTTTCATACCTTCCTCGGTTCATCACTGTTATTGATCTTTATAGAGGTGAGCAGTATTGAGTGGGAGTTCATAAACATGTCAGAGCAAGAAGAGGATCTCATTTACAGAATGTACAAACTGGTGGGAGACAGATGGAGTCTCATAGCAGGTAGGATTCCAGGTCGAAAAGCTGAAGAGATTGAGAGGTTTTGGATTATGAGACATTCCCAACTGTTCGCTTCCAGAAGGCAAAACCTCACCTATTGCAAATCCTAA 351 0.4074 MDKCCRKQEKTEISYSEGQVLSLSTSDSSNYGFHTFLGSSLLLIFIEVSSIEWEFINMSEQEEDLIYRMYKLVGDRWSLIAGRIPGRKAEEIERFWIMRHSQLFASRRQNLTYCKS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0267 116 Pfam Myb-like DNA-binding domain 58 97 IPR001005 -
Alju11g0267 116 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 57 100 - -
Alju11g0267 116 FunFam MYB-like transcription factor 57 99 - -
Alju11g0267 116 Gene3D - 59 99 - -
Alju11g0267 116 SUPERFAMILY Homeodomain-like 59 97 IPR009057 -
Alju11g0267 116 SMART sant 54 102 IPR001005 -
Alju11g0267 116 CDD SANT 57 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0267 Alju-ChrAlju11 2668975 2671082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0267 58 110 MYB Transcription Factor Family AT5G52600 56.604 7.08e-16 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju11g0267 Myb_DNA-binding 1.1e-06 CL0123