Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0266 ATGGAGGAAGGGCAAGTTAGTCTGATCAAAGAGCTAAACCAAGGGAAGGAGCTTGCTAGGTTGCTCTGTAACCATATTGCATCTTCTTCTTATGAGACCAATGAGTTCTTGATTGAGAAAATACTCTCTTCTTATGAGAAAGCACTTAACTTGCTTACACGTTCACAAAATGTGGCTGAGCCTAATAACCCCACCATTAATGCTCATCATGGGAGCCCCAGATTTGAGGAAGACAATCCCAGAGATGTCTACAAGAAAAGAAAGATCATGCCCAGGTGGACAGAGCAAGTGAAGGTTTGTTCAAGAACAGGGATTGAGGGTTCATTGGATGATGGATATAGTTGGAGAAAATATGGACAGAAGGATATCCTTGGAGCTAAATTTCCTAGAGGATACTACAGATGCACTCATAGATTTTTACAAGGTTGTCAAGCAACAAAACAAGTTCAAAGGTCTGATGAAGATCCAACAGTATTCGAAGTGACCTACAGAGGCAGACACACCTGTAACAACCAGGCAGTATCATCAAAGAAAAAGATGGGTTTTGGAGAAAACCATAATAATCATCAACACCAATCACATGATGAGGAAGAACAAGAAGAAGAAGAAGAAGAAGAAAAGTTGGAACAATCCCTAGTGACATTCTTCAATTTTGAACCAGAACTTGAAGTCAAAATGGAGGATATTTTCCCAACATCGAGTGGATTTCCTTCAACATCTGATAATAATAACCAGTTCGTGGAAAACTTATCTGTTGATTTCATTTCCCCATCAACCTCGGAATCGAACCTTTTTGGTCTGTCGGCCTGTCACATGGGAAGTGGAGGATTAGGCCATAACGTGCAAAGTTCAGAATCTGAAGTGACTGACATAGTTTCAGCTCCAACCTCAGTCACCAATTCGCCTTTGCTAGATTTGGATGTATTGTTTGATAAGCAAGATTTTCAATCCGATTTCCCTTTCAACACTTTTGAATTTTTATCTTCTTAG 990 0.399 MEEGQVSLIKELNQGKELARLLCNHIASSSYETNEFLIEKILSSYEKALNLLTRSQNVAEPNNPTINAHHGSPRFEEDNPRDVYKKRKIMPRWTEQVKVCSRTGIEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRFLQGCQATKQVQRSDEDPTVFEVTYRGRHTCNNQAVSSKKKMGFGENHNNHQHQSHDEEEQEEEEEEEKLEQSLVTFFNFEPELEVKMEDIFPTSSGFPSTSDNNNQFVENLSVDFISPSTSESNLFGLSACHMGSGGLGHNVQSSESEVTDIVSAPTSVTNSPLLDLDVLFDKQDFQSDFPFNTFEFLSS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0266 329 MobiDBLite consensus disorder prediction 182 196 - -
Alju11g0266 329 SMART WRKY_cls 109 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g0266 329 MobiDBLite consensus disorder prediction 179 208 - -
Alju11g0266 329 ProSiteProfiles WRKY domain profile. 104 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g0266 329 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 247 IPR044810 GO:0003700
Alju11g0266 329 SUPERFAMILY WRKY DNA-binding domain 108 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g0266 329 Coils Coil 186 214 - -
Alju11g0266 329 FunFam WRKY transcription factor 53 95 172 - -
Alju11g0266 329 Gene3D WRKY domain 94 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g0266 329 Pfam WRKY DNA -binding domain 110 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0266 Alju-ChrAlju11 2614472 2616224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0266 27 173 WRKY Transcription Factor Family AT5G24110 48.993 1.29e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju11g0266 WRKY 1.7e-27 CL0274