Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0208 ATGTCTCCGCCGGAGCCGGAACCCTCCCTCCTAGCCGCCCCCGATGACAACAACTACAACTTGCAGGATGACGCCGTGGCTACTTTCATCAATGACCTCAGCGTGGGTTCCTTGTTCACCAAGGCACTCATCATCGTCATCATCGTCTTCCTCGTCTACTGGCTTTGTATCTCCATTTATCGCCGCTACCACGACCACGACAACCATCAACACCGCAGCCAACTCGACGGCGGCGGTGTCCCTAACTCAACTCCTAATAATAGTAATCCGGTCGACCACCACCACCATGACGACGAAGAGAACCTTGTCCAAAATAATGCCGACATTGAAGCCGCCATCAACTCGTACCCGTGTTTCATGTACGGTGATAAGAAACACGATGACCACCAGAACAACACGACATGTCCGATTTGCATGTGCGAGTATTTGGAGTCAGAGACGATGAGGATGATGCCACAATGTGGGCATTACTTTCACCTTAAATGCATTGATGAATGGCTGAGGATTAGTTGGTCGTGTCCTGTGTGTCGTGACTCGCCGTCGTTGCCATGGGCCACGCCGTCGTCTTAG 570 0.5211 MSPPEPEPSLLAAPDDNNYNLQDDAVATFINDLSVGSLFTKALIIVIIVFLVYWLCISIYRRYHDHDNHQHRSQLDGGGVPNSTPNNSNPVDHHHHDDEENLVQNNADIEAAINSYPCFMYGDKKHDDHQNNTTCPICMCEYLESETMRMMPQCGHYFHLKCIDEWLRISWSCPVCRDSPSLPWATPSS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0208 189 ProSiteProfiles Zinc finger RING-type profile. 135 177 IPR001841 -
Alju11g0208 189 PANTHER RING-H2 FINGER PROTEIN ATL67 29 188 IPR044289 GO:0016567|GO:0016740
Alju11g0208 189 MobiDBLite consensus disorder prediction 70 97 - -
Alju11g0208 189 MobiDBLite consensus disorder prediction 75 89 - -
Alju11g0208 189 SUPERFAMILY RING/U-box 119 182 - -
Alju11g0208 189 SMART ring_2 135 176 IPR001841 -
Alju11g0208 189 Pfam Ring finger domain 134 177 IPR001841 -
Alju11g0208 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 181 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0208 Alju-ChrAlju11 2107601 2108170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0208 43 181 C3H Transcription Factor Family AT1G28040 32.374 2.08e-20 84.7