Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0196 ATGGAGGACGATTGGGATCTCCACGCCGTCGTCAGAGGCTGCACCACCGTCTCCTCCTCCTCCACCACCTCCACCTCCGCCGTCACTCCCACCTCCTCTGCATCTTCCTCTGTTTTTGGGCTTCCCCTGTTTTTTGGTACCGAAAAAGTTAGCCAAGTTTCGTCTCTCTCAGATTTAGACCCTCTTGAACCCAAACCTTCTTCCTCCATTGAAGAATTGCACGAGCTCTGTAAGCCTTTCTTCCCCAAATCATCCACCAAGCCGCCTTCTTCATCGTCTTCTCTGGTTTCTCCTCTGTCTCCTTCTTCTTCCTCCTTCTCCTACAATTCTCCCACAAAACCTGTTCAAACCCAGCACAAACAACAGAATCTGCAACCCAAGAACAAGTTGTCTCACGCTGGTCCTGTCTCCACCACCCCTAGATCTAAGAGAAGGAAGAATCAGCTCAAGAAAGTTTGTCAGGTTCCAGCTGAGTCTCTCTCCTCTGATATCTGGGCATGGCGTAAATATGGCCAGAAACCCATCAAGGGATCTCCGTATCCAAGGGGATATTACAGATGCAGCAGCTCGAAAGGATGTTTAGCTCGGAAACAAGTGGAGAGGAACAGATCGGACCCATCGATGTTCATAGTGACCTACACGGCGGAGCACAACCACCCTGCTCCTACTCATCGGAACTCTCTCGCCGGCTCCACCCGTCAGAAGCCCTCGACCCCCACTACCACCGGCGTGGGAGATGAAACAGAGAAAGTCCTGACGAAAGCAGGTTCTCCGGCGACCTCTGGTGTGGAAGAAGAAGAGACAGTACCTCCAAGCACAGACTTCGAAAGCAAGGTGGAAATGGAAGATTTGATGGAGGAAGACGAAGACGACGAACTTGGGTTATCAGATTCGGTGTTAACAGATGATTTCTTTGAAGGGTTAGATGAACTTACAGGGCCCTCGCCGCCGTCTTCTACGGCGGCTCCGGTCACCGGAGACTGCTTTGCGGACCCCTTCTCTACTGGTTTCTCTCTGCCGGCATGGCCGGCCGCAAACGCCGCAGCCACCACCGCCGGTGGCAATTGTTGA 1071 0.5275 MEDDWDLHAVVRGCTTVSSSSTTSTSAVTPTSSASSSVFGLPLFFGTEKVSQVSSLSDLDPLEPKPSSSIEELHELCKPFFPKSSTKPPSSSSSLVSPLSPSSSSFSYNSPTKPVQTQHKQQNLQPKNKLSHAGPVSTTPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPSMFIVTYTAEHNHPAPTHRNSLAGSTRQKPSTPTTTGVGDETEKVLTKAGSPATSGVEEEETVPPSTDFESKVEMEDLMEEDEDDELGLSDSVLTDDFFEGLDELTGPSPPSSTAAPVTGDCFADPFSTGFSLPAWPAANAAATTAGGNC 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0196 356 SMART WRKY_cls 161 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g0196 356 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 312 IPR044810 GO:0003700
Alju11g0196 356 MobiDBLite consensus disorder prediction 81 154 - -
Alju11g0196 356 Gene3D WRKY domain 145 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g0196 356 FunFam WRKY transcription factor 22 145 215 - -
Alju11g0196 356 MobiDBLite consensus disorder prediction 219 247 - -
Alju11g0196 356 MobiDBLite consensus disorder prediction 216 277 - -
Alju11g0196 356 SUPERFAMILY WRKY DNA-binding domain 159 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g0196 356 MobiDBLite consensus disorder prediction 84 142 - -
Alju11g0196 356 MobiDBLite consensus disorder prediction 16 37 - -
Alju11g0196 356 Pfam WRKY DNA -binding domain 163 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g0196 356 ProSiteProfiles WRKY domain profile. 156 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0196 Alju-ChrAlju11 1999394 2000693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0196 1 354 WRKY Transcription Factor Family AT4G01250 46.667 2.09e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju11g0196 WRKY 2.5e-25 CL0274