Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0194 ATGGGCGATTGCGATGGAGGGGACTTTGCTGGAACCATTTGCTCAATCTGCTACGAAGTTCTCAAGCCCATCGTCGAAGACCTCCAATCCATCAATATCTGCGGCCATGTCTTCCACGAGCTCTGTTTGCAGCAATGGTTCGAGTACTGTTCAACGGCAAAGAAATGCACTTGCCCTGTGTGCAAGCAGAGTTGTAAAGCGAGCGATGTTGCTCGGTTGTATTTCCAGTCTATCGGAGACGTGAACGATGCTGTTCTTCCTGACAAACCCATTGGGTCTAAGGAGGCAAATGGGGGAGTTTCGAGTAGAGAAGTGAAAATGTTGGAATTGAAAGTTTCGGGGCTCAGTTCAAAACTGGAGCAACAGGAGAAGAAATTGGGAGATGTTACTAATGAGCTTTGTGCTTGCAAGGAACATGCAAAATTAGATGCAGAACTTAAAAACGAAGCTTTGAAACAAAGAGCATACATACAAAACCACCTTCTTATGAAATCAGAGGAGCTTGAAAAGTCAACTTTGGAGTGTTCGAGATTACAAGATAGAAATATGGCACTAGCTAAAGAACTGGCAGCATTCAAATTGGTAGTAGATCCAAACCTTGATGAAGATGAGGTTTTGAAGCTTGCCACATTGGGTAATGGTGCCAACGGTAAAGATACGATTGACACATTACGAAGATCTTTGGTCATGCGGAACAGGAGTTACAAAGAATTAATGACCAAGTGCAATATTCTGGGAAGAGGGGAGGCACGTTATAGTAGAAAGCTTGAGAAGGCCAAAGAGAAAATCAAGAAACTGAAGGAAAGGATACAAGAACTGGAAACAGCAGCTGAAGCAAAAGAGAATGAAATCCTAAGATCTCTGAAAGTTACAAAGAAAACAGGTTGTTTAAAGAATCTTGAAAGCAATAGCAGTTATAATTCTGATCTATTGTCAGCAGATAAAATTCCATCAAAAGAACATGGGAAGCAAATTTTGACACCCCATTCCAGAACGGATCTCTCTGTGAACATCAATAATAAAGTGTTGCAATCTGCAAAGATAGACAACATTGATGGTAAGGAAAGTAGAGAAAATAAAAATGTGAATTTCAGCAAAAAAAGTTCAGCTAGGATGTCTCTTAATGGAGAGGAAAATTACATCTCACTTGATGAAGAAGATTCAGAATTTACTAAAGCTTTGCCAGGATTTGGAAAATACAACTGCAAAGACCAAGGTAGTGATACTCTTGCTCTTAGGAAGCCCACTTCAGCAAAGCCAGAGGCAGCTTCTAGTGCAGAGAGAGAACCAGCAATGCAAGAATACAACCTGGCTGAGCCTTTAAGAATTGACGTTAACGATGAGTTAGGTAAAAATGCTGCTGGTACTATGTCTGAAGATGTGACATTACTAGACAATGCGAAACAAGTTCAGACCATTATTAATATTCGAAAAGAAAATCTATCTCTACTACCACTTTCAAGTCCAGGTGACATTTGTTTTTCTGGCGGCTTACTTGGTCCTGATGGAACTAATCGATACTTGGGGAGATGGTGCAAGCGTGGACAGAAAAAGGAATCAGTCACTCCAAAAGCTTCAATCAATGGTGAATTGATAGCTGTAGGGGCTGATGGTAGAGGTGGTAAAGTTAAAGTTCTAAGATCTCCAAACCAAACCTTCCAGAATTGTAAGGAGAATTCAGCACGTTCAAAAAGATTGAAACTTGGACCTAAAACAAACAGCATGCAGTCCCAGGGGTGCCTGCAGATAGAACACTTCTTTGGGAGGGTCAGTCACTAG 1779 0.4109 MGDCDGGDFAGTICSICYEVLKPIVEDLQSINICGHVFHELCLQQWFEYCSTAKKCTCPVCKQSCKASDVARLYFQSIGDVNDAVLPDKPIGSKEANGGVSSREVKMLELKVSGLSSKLEQQEKKLGDVTNELCACKEHAKLDAELKNEALKQRAYIQNHLLMKSEELEKSTLECSRLQDRNMALAKELAAFKLVVDPNLDEDEVLKLATLGNGANGKDTIDTLRRSLVMRNRSYKELMTKCNILGRGEARYSRKLEKAKEKIKKLKERIQELETAAEAKENEILRSLKVTKKTGCLKNLESNSSYNSDLLSADKIPSKEHGKQILTPHSRTDLSVNINNKVLQSAKIDNIDGKESRENKNVNFSKKSSARMSLNGEENYISLDEEDSEFTKALPGFGKYNCKDQGSDTLALRKPTSAKPEAASSAEREPAMQEYNLAEPLRIDVNDELGKNAAGTMSEDVTLLDNAKQVQTIINIRKENLSLLPLSSPGDICFSGGLLGPDGTNRYLGRWCKRGQKKESVTPKASINGELIAVGADGRGGKVKVLRSPNQTFQNCKENSARSKRLKLGPKTNSMQSQGCLQIEHFFGRVSH 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0194 592 MobiDBLite consensus disorder prediction 408 431 - -
Alju11g0194 592 Coils Coil 168 188 - -
Alju11g0194 592 Pfam Ring finger domain 13 62 IPR001841 -
Alju11g0194 592 SUPERFAMILY RING/U-box 13 66 - -
Alju11g0194 592 PANTHER RING ZINC FINGER PROTEIN-RELATED 6 590 - -
Alju11g0194 592 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 75 IPR013083 -
Alju11g0194 592 Coils Coil 105 132 - -
Alju11g0194 592 ProSiteProfiles Zinc finger RING-type profile. 14 62 IPR001841 -
Alju11g0194 592 CDD RING-H2 14 62 - -
Alju11g0194 592 Coils Coil 249 290 - -
Alju11g0194 592 SMART ring_2 14 61 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0194 443 592 C3H Transcription Factor Family AT4G01270 39.752 2.90e-21 95.5