Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0182 ATGGTGTCCGTGAATCTAAATCCAGCTCAAGGATTTTACTTCTTCGATCCCATGAATACCGGCGTTCCCGGTCTCAATCACCCTCTGCCGCCCCCCACGGCGGCTCCGGCCGCTGCCAATACTTATCTGGATGATCCGAACAAGAAGATCCGAAAACCGTATACGATTACCAAGTCCAGAGAGAACTGGTCCGAGCAGGAGCACGACAAGTTTCTTGAAGCTCTCCAATTATTTGACCGTGATTGGAAGAAGATTGAAGCATTTGTTGGGTCAAAAACTGTTATCCAGATAAGAAGTCATGCGCAGAAGTATTTTCTAAAAGTTCAGAAGAATGGGACTAGTGAACATGTACCTCCTCCCCGGCCAAAGAGAAAAGCTGCTCATCCTTATCCACAAAAAGCCCCTAAAAATGCTGCATTGGCATCTCAAGGTACTGGACCAATGCAATCTTCTTCCGCTTTTGCTGAGCCTGCATACACTTATAGGCCAGATTCATCATCCGGGCTCGGAACACCAGTTACCAGTGTGCCTTTGTCATCATGGAATTGTAATGCTATGCCGCCGGTCAGCATGCCTCAAGTGGCCAAAGATGATATGGGATTGGTTGGACAAGCTGTTCCTCGTAGTTGTTGCTATAGCAGTAGTAATGAGAGCGTTCCTGGAGTCTGGCCTAATAATAAAAGTGTAGATCAAGTGGACCAAGGCAAGCCGATAACTGTTATGCCAGATTTTGCACAAATCTATAGGTTCATCGGCAGTGTGTTTGATCCAAATGGAACTGATCATCTACAGAGATTGAAAAACATGGACCCAATAAATGTGGAGACAGTATTGTTGTTGATGAGAAACCTCTCCATCAATTTAACAAGTCCTAAGTTTAAGGATCATCGGAAGTTGCTTTCGTCGTATGATGTTGATGCGAAGACTGGTCGTATGTACAATGACCCCCTGACTAACAAATCCGAAAGTGCTGTTCTGTCTGCTTAG 987 0.4529 MVSVNLNPAQGFYFFDPMNTGVPGLNHPLPPPTAAPAAANTYLDDPNKKIRKPYTITKSRENWSEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAALASQGTGPMQSSSAFAEPAYTYRPDSSSGLGTPVTSVPLSSWNCNAMPPVSMPQVAKDDMGLVGQAVPRSCCYSSSNESVPGVWPNNKSVDQVDQGKPITVMPDFAQIYRFIGSVFDPNGTDHLQRLKNMDPINVETVLLLMRNLSINLTSPKFKDHRKLLSSYDVDAKTGRMYNDPLTNKSESAVLSA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0182 328 ProSiteProfiles SANT domain profile. 58 111 IPR017884 -
Alju11g0182 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Alju11g0182 328 Gene3D - 62 110 - -
Alju11g0182 328 SUPERFAMILY Homeodomain-like 54 110 IPR009057 -
Alju11g0182 328 PANTHER SWI/SNF COMPLEX-RELATED 42 289 - -
Alju11g0182 328 SMART sant 59 107 IPR001005 -
Alju11g0182 328 Pfam Myb-like DNA-binding domain 60 105 IPR001005 -
Alju11g0182 328 NCBIfam myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Alju11g0182 328 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Alju11g0182 328 MobiDBLite consensus disorder prediction 138 153 - -
Alju11g0182 328 FunFam protein REVEILLE 6 isoform X1 62 110 - -
Alju11g0182 328 CDD SANT 62 105 IPR001005 -
Alju11g0182 328 MobiDBLite consensus disorder prediction 109 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0182 Alju-ChrAlju11 1825351 1828232 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju11g0182 Myb_DNA-binding 7.6e-11 CL0123