Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0178 ATGTTAGCATACGACGCCGCTTTTCTCGATAAAGAGCTCTCTAAACGCACCTCAATCTTTGGCCTCCCGCTCTGGGTCGTCGTCGGAATCATCGTCGGCGCCGTCATCGTCATTGCCCTCTTCCTCCTTTCCCTCTGCCTAACCTCTCGCCGCCACCGACGCCGCCACAATCCAAAGAAGATTTACGATCCTAAAGATACTGGAACTCCTGTTGTATCGAAGGAAATCCAGGAGATCGTCCACCTACCTGGACCCAACCAGCACCACCCTGCGCCACTGCCGGAGATCCACGCTGACATCGGAAAATCAGAGCACCGGGTCGTGGTGTTTTCCGATCGGATTTCTAGCGGAGAGAGCAGGGGTACGGCCTTGAGCGTTTCGGAGGCGAGGTCGTCTTTTGGTGGTGGGAGTGTTGGGCCAGAAGTCTCGCATCTGGGGTGGGGTAGATGGTACACTCTGAGAGAACTTGAAGCTGCGACTAATGGATTGTGTGAAGAAAACGTGGTTGGGGAAGGTGGCTATGGAATAGTGTACAAAGGAGTACTCAGTGATGGTACTCGAGTTGCAGTAAAAAACCTGCTAAATAACAAGGGCCAAGCCGAGAAAGAATTTAAAGTGGAGGTAGAAGCTATTGGTCGTGTGCGGCACAAGAATCTTGTTAGGCTTCTGGGATACTGTGTTGAGGGAGCATACAGGATGCTTGTGTATGAGTATATTGACAATGGCAATCTAGAACAATGGCTTCACGGGGATGTTGGAGCTGTTAGCCCTCTGACATGGGATATTCGTATGCTCATCTTACTGGGCACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTCGAACCAAAGGTTGTTCACCGAGATATAAAGTCTAGCAACATACTCCTAGATCGCCAGTGGAACCCGAAAGTTTCAGATTTTGGGCTTGCTAAGCTCTTGTGTTCTGAGAATAGTTATGTCACAACTCGAGTCATGGGCACATTTGGTTATGTCGCACCAGAGTATGCCTGCACTGGAATGCTGACCGAGAAAAGTGATATTTATAGCTTTGGAATACTTATCATGGAGATCATTACTGGGAGAAGTCCTGTTGATTATGGTAGACCACAAGGAGAGGTTAATTTAATAGATTGGTTAAAAACCATGGTCGGGAATCGGAAAGCCGAGCAAGTAGTCGATCCCAAGCTCCCCGAGATGCCATCTTCAAAAGCTCTCAAACGCGCACTGCTGGTTGCTCTTCGATGTGTTGATCCTGATGCAACTAAGAGGCCTAAAATGGGGCATGTCATCTACATGCTTGAGGCAGATGACCTACTTTTTCCTGATCCTCAGGAACGCCGGATCAAGGAAGAATCTTCGCATTCCAACCGTGATTGTCAAGAGAAGAAGGAATTGAATTTGGATAAAAGAAGTAAAGGAGAAGGGATCACTGATCAAAGTGAAGCAGATGATAGCAGCAGAAGTCATCATCAGCCAACTAGGTGGAGATAA 1494 0.4813 MLAYDAAFLDKELSKRTSIFGLPLWVVVGIIVGAVIVIALFLLSLCLTSRRHRRRHNPKKIYDPKDTGTPVVSKEIQEIVHLPGPNQHHPAPLPEIHADIGKSEHRVVVFSDRISSGESRGTALSVSEARSSFGGGSVGPEVSHLGWGRWYTLRELEAATNGLCEENVVGEGGYGIVYKGVLSDGTRVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYIDNGNLEQWLHGDVGAVSPLTWDIRMLILLGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNPKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEIITGRSPVDYGRPQGEVNLIDWLKTMVGNRKAEQVVDPKLPEMPSSKALKRALLVALRCVDPDATKRPKMGHVIYMLEADDLLFPDPQERRIKEESSHSNRDCQEKKELNLDKRSKGEGITDQSEADDSSRSHHQPTRWR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0178 497 PANTHER OS01G0323000 PROTEIN 7 461 - -
Alju11g0178 497 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Alju11g0178 497 ProSiteProfiles Protein kinase domain profile. 163 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0178 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Alju11g0178 497 FunFam Probable serine/threonine-protein kinase At1g01540 143 238 - -
Alju11g0178 497 SMART serkin_6 163 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0178 497 Pfam Protein kinase domain 166 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0178 497 MobiDBLite consensus disorder prediction 449 497 - -
Alju11g0178 497 Gene3D Phosphorylase Kinase; domain 1 146 238 - -
Alju11g0178 497 SUPERFAMILY Protein kinase-like (PK-like) 142 435 IPR011009 -
Alju11g0178 497 CDD STKc_IRAK 169 435 - -
Alju11g0178 497 Gene3D Transferase(Phosphotransferase) domain 1 239 442 - -
Alju11g0178 497 FunFam Putative receptor-like serine/threonine-protein kinase 239 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0178 Alju-ChrAlju11 1791694 1794555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0178 26 435 Trihelix Transcription Factor Family AT5G38560 39.663 3.74e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Alju11g0178 Pkinase 5.3e-46 CL0016