Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0154 ATGGGCTTTCCGGTCGGATACACCGACGTCGTTTTGCCTAATCTCTTCCTCCACACTCTCTCCCTCCTCGGATTCATCCGCAACCTCATCTTCCTCCTCTTCCACTTCCTCGGCCTCTCCGATTTCCTCGAAACCGAGGTTGTCTGGTCCGAATCTCACGCCCGATTGCCCGACAGCCCTCCGGTGTCGGCGCTCCTGATCCGCGAATTCCTCCCCGTCGTCAAGTTCGCCGACCTCCTCGCCGCTGCCAAATCCGCCGGCGACACGCCGGAGAGTTGCGCCGTCTGCCTCTACGAGTTCGAGTGCGAGGAGGAAATCAGGTGCTTGACGAATTGCAAGCACATTTTTCACCGGGCTTGTCTCGACCGTTGGATGGATCACGATCAGAAGACTTGTCCCTTGTGTAGGACCCCCTTTGTGCCTGATGATATGCAGGATGATTTCAATCAACGTCTCTGGGCTGCGTCTGGAGTCTCTGATGTTTATGGAGACTACACTTCCCTGAAAGATAATGCACTTGATCATATAATACTGCAAGCTAGGGTTATTGTCGTCTTTAAGACATAA 567 0.5379 MGFPVGYTDVVLPNLFLHTLSLLGFIRNLIFLLFHFLGLSDFLETEVVWSESHARLPDSPPVSALLIREFLPVVKFADLLAAAKSAGDTPESCAVCLYEFECEEEIRCLTNCKHIFHRACLDRWMDHDQKTCPLCRTPFVPDDMQDDFNQRLWAASGVSDVYGDYTSLKDNALDHIILQARVIVVFKT 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0154 188 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 156 - -
Alju11g0154 188 ProSiteProfiles Zinc finger RING-type profile. 93 136 IPR001841 -
Alju11g0154 188 SUPERFAMILY RING/U-box 92 142 - -
Alju11g0154 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 141 IPR013083 -
Alju11g0154 188 SMART ring_2 93 135 IPR001841 -
Alju11g0154 188 Pfam Ring finger domain 92 136 IPR001841 -
Alju11g0154 188 FunFam RING-H2 finger protein ATL73 67 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0154 Alju-ChrAlju11 1597111 1598203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0154 1 167 C3H Transcription Factor Family AT1G63840 51.977 9.92e-55 169