Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0142 ATGAAAAGTCCAATTTCCCATTCACGTCGCCGGAGCTCCAGCTCCGGCTACCGCACGCCCGATCACCGTCACACCTACACTTCCAGCTATGATTCCTCCGGGGTTAGCACCACCATTGACAAGTCAAACTCCTCTCGTAACCCAGTCACGGCCGCAGCCAGATCAGTGGCCGCGGTTTTCGTTGCGTGCTTCACCCCGCCGGACGAGAGTAACTCCAAGAGCTTCGTCGATTCTCGGGAGTTCAAAGCTTCATCTTCCTCCTCCGTTGCATCCGATTCTTCGGGAGCTGGTACTCAGAGAAGGCAAGGTTCACATCGACGATTGAGTTCCAGTTCATACAAGTCAACTCAGGGAAAAGATCCTAGATCTCTGAATTTCACCATGGAGGATATCTTCCAAGCCACAAGAAACTTCTCCCCTGCTTACAAGGTCGGTCAAGGTGGTTTTGGTACAGTGTACAAGGCAAATCTCCAGGATGGAACTGTTGTTGCAGTAAAGCGTGCCAAGAAGAGTTTGTATGAGAAGCATTTGGGTAGTGAGTTTCAAAGTGAGATCCAAACGTTATCACGGGTTGAACATTTGAATTTGGTCAAGTTCTATGGATATTTGGAACGAGGAGATGAAAGAATTCTTGTCGTGGAGTATGTCTCAAATGGAACCCTTAGAGAGCATTTAGATTGCAATCGTGGGAACATTTTGGACCTTGCTTCTCGTCTAGACATTGCCATTGATGTGGCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATTATTCATAGAGACATTAAATCCTCCAACATTCTTATTACTGAAAATTTGAGAGGTAAGGTAGCAGACTTTGGTTTTGCTAGACAGGCACCTGACACTGATTCTGGTGTTACCCATGTATCTACCCAAGTTAGAGGAACTGCCGGCTATTTGGATCCTGAATATCTCAGAACCTATCAACTGACTGAGAAGAGTGATGTCTATTCCTTTGGCGTTTTACTTGTTGAACTTGTCGCAGGTAGACGTCCCATTGAACCAAAATTTGAACTGAAGGAGCGAATAACTGCAAAATGGGCTATGAAGAAATTCATTGAGGGCGATGCCATCTCGGTGTTGGACCCAAAACTAGATCACAGTGCTGCAAATAATCTGGCGCTAGAAAAAATACTTGAACTGGCCTTCCAGTGTTTGGCACCTCGTAGACAAAGCAGGCCTAGTATGAAGAAGTGTGCTGAGATCCTTTGGACCATCCGTAAGGATTACAGAGAGCTATCAGCTTCATCAGATTTTCGTTCATTTTCCTCTTCTTCCCAGAGGAGTGCATCAATAAAATAG 1332 0.4535 MKSPISHSRRRSSSSGYRTPDHRHTYTSSYDSSGVSTTIDKSNSSRNPVTAAARSVAAVFVACFTPPDESNSKSFVDSREFKASSSSSVASDSSGAGTQRRQGSHRRLSSSSYKSTQGKDPRSLNFTMEDIFQATRNFSPAYKVGQGGFGTVYKANLQDGTVVAVKRAKKSLYEKHLGSEFQSEIQTLSRVEHLNLVKFYGYLERGDERILVVEYVSNGTLREHLDCNRGNILDLASRLDIAIDVAHAITYLHMYIDHPIIHRDIKSSNILITENLRGKVADFGFARQAPDTDSGVTHVSTQVRGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVAGRRPIEPKFELKERITAKWAMKKFIEGDAISVLDPKLDHSAANNLALEKILELAFQCLAPRRQSRPSMKKCAEILWTIRKDYRELSASSDFRSFSSSSQRSASIK 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0142 443 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
Alju11g0142 443 ProSiteProfiles Protein kinase domain profile. 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0142 443 Gene3D Phosphorylase Kinase; domain 1 97 215 - -
Alju11g0142 443 SMART serkin_6 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0142 443 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 216 427 - -
Alju11g0142 443 MobiDBLite consensus disorder prediction 86 122 - -
Alju11g0142 443 MobiDBLite consensus disorder prediction 8 50 - -
Alju11g0142 443 Gene3D Transferase(Phosphotransferase) domain 1 216 437 - -
Alju11g0142 443 PANTHER OS01G0750732 PROTEIN 34 434 - -
Alju11g0142 443 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 100 215 - -
Alju11g0142 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Alju11g0142 443 SUPERFAMILY Protein kinase-like (PK-like) 120 417 IPR011009 -
Alju11g0142 443 Pfam Protein kinase domain 142 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0142 443 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0142 Alju-ChrAlju11 1401510 1403993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0142 126 411 Receptor kinase-like Gene Family AT1G79620 45.172 1.85e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Alju11g0142 Pkinase 3.5e-51 CL0016