Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0140 ATGGGAGGTTGCTGCTGCAGTGCCAGAAAACCTCATCTGCATGGAACACCAGTTTATATCTATTGTCCTCCAGCTTTGGAAGAGCATGAGTCCTTAACTACTAATGATAGTACCGCTGTTCCACTCACTGCCGGATTGCTGGTGGGTTTGGACCTTCAGGAATCAACACCTGATACCTACCAGCCCCCTCCTGCACCATTGCCATATGATACGGTTTTGGGTTGTCCAGCATCAACTGATTCTGAGTCAGGCAGGGAAACAATTAGTCGTAGTAGTTTTGCAACCTTGCTTACATGTGAAGATATTGAAGACTCAGAATGCAAAGTTCAAGCTAATTCTATGCCTGCATCTCCAAAGAAGCCAGAACTAACAAAATCAAATGAACCTCATGTATTAGTGACAGAGGAAGAGGATGGTTGCCCAATTTGTCTTGAAGAATATGATGTTGAGAATCCTAAAACTCTGACCAAGTGTGAACACCACTTTCACCTATCCTGCATTCTTGAGTGGATGGAACGAAGTGACTCTTGTCCCATATGCGATCAGGAGATGATCTTTGACCAGACATTGGATTAG 576 0.441 MGGCCCSARKPHLHGTPVYIYCPPALEEHESLTTNDSTAVPLTAGLLVGLDLQESTPDTYQPPPAPLPYDTVLGCPASTDSESGRETISRSSFATLLTCEDIEDSECKVQANSMPASPKKPELTKSNEPHVLVTEEEDGCPICLEEYDVENPKTLTKCEHHFHLSCILEWMERSDSCPICDQEMIFDQTLD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0140 191 FunFam Putative E3 ubiquitin-protein ligase RHB1A 116 185 - -
Alju11g0140 191 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 37 188 - -
Alju11g0140 191 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
Alju11g0140 191 Pfam Ring finger domain 140 180 IPR001841 -
Alju11g0140 191 SMART ring_2 140 180 IPR001841 -
Alju11g0140 191 SUPERFAMILY RING/U-box 134 187 - -
Alju11g0140 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 190 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0140 Alju-ChrAlju11 1384023 1387133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0140 1 191 C3H Transcription Factor Family AT4G00335 56.545 5.83e-73 216