Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0139 ATGTCGCTTCTCTCTTCTCCTTCCTCTTCCTCCGCCATACCCTTCTCTCTCTTCTTCCTTTGCCTCCTTGCTTTTTCCTCTTCTCAGCCAAACTCTTCCAGCAGAGGGAGGAAGCTGCAAGCCAACCGTGTTCTCTTGAGAGCAAACGAGACCTTGCCCAGTGAGAATCGCACATTCGACCTTGGCTTCTTCAGCTTCAATGCCGGACAGCCCAATTATTACTTGGCCGTTCGCTACGCGTCGATTCCACTTCCCACGTACGTCTGGGTGGCCAATCGCGAGAAACCCAGCAAAAATCTCACTGATTCGACGCTGGAAATCACTGAAACTGGCCTCCTCGTTGTCAAAGATTCACCAACCTCGATCCTTTGGCATAGTACGAATTTAGGAACTTCAGGAAGAGTGGAATTAAAGCTTTTAGAAAGTGGGAATTTGGTTCTGCTCACTCGGGAAGGCTCTGTTTCGTGGCAGAGCTTCGATTTCCCCACGGACGCGTGGCTTCCGGGTATGAATCTGACCCGGAACCGATCCTTGTTGTCGTGGCGGAGCCCCACGGACCCCTCGCCGGGACTCTATTCTCTGCGGCTGAGACCGCCGGGCTACGGTGAGTTCGAGCTCCTCTTCAATAACTCCAAATCTTATTGGACCACCGGAAGGTGGACCGGCGACTCGTTCCTCAACATTCCGGAAATGATGATTCCATATCTCTATCAATTCGACTTTTCGAATCCGTTTACACCAACGGCGTCGTTTGGATTCCGGGAGAAGCCTCTGAACGGGCTGAGCCCGCCAACGTATTTCCGGGTCGAACCTCACGGGCAGGTCCGACAGTACACATGGTGGTCTCAGACCGGAAGCTGGAACATTTTCTGGTCAGGGCCGAAAAATGTGTGTGACGTTCAAGACCTGTGTGGTAGCTTAGGAGTCTGCAAAGGCGAAACGACCACGATGTGCGAGTGCGTCTCCGGTTACAAGCCCTTAGACGACGGTGGATGGGCTTCCGGAGACTACTCCGGTGGGTGCCATCGGAAAGCCGATAGTCCCTGCGATAAGAATGATGGGTTCGTAGATATGGGGGTTATGAGCTTCGAAGCACCCAATGTGCAGTCGTTTAAAACCAAATCTCGAAGCAGTTGCGAGACTAATTGTTTAAACTCATGCGATTGTATTGGCTCATCTTTCAACCAAAGAACCGGCTCCTGCCAGAACTTTTACGGCTCAATTCTGAATCTCCGTAATTCATCTTCTGAAACCTCTATTGATGGCAATTTGTTTGTTAGGGTACAGCGAGGAGAATCTGAGAAGAAACTGAATCGGCAAACTCTGATTGGCACTATCATTGGGGTAATTGCTTTTCTAGGGTTAATAGTGGCGACATTGTTGGTATTGCTGAATCGAAGGCGGAAGAAGAAGAAACTAGAAGAAGATGGATTGATTCCTGTTCTGAATCTTCAGTTATTTTCCTACAAAGAGCTTCAATTAGCGACTCGGGGATTCTCAGAGAAGATAGGTCACGGTGGGTTTGGGACAGTATTTCAAGGAGAATTACCAGATTCAACACGCGTAGCAGTGAAGCGACTAGAGAGACCAGGTGGTGGAGAAAAGGAGTTCAGAGCAGAAGTTTCCACCATAGGTAATATCCAACATATTAATCTCGTTAGACTCAGAGGCTTTTGCTCTGAAAATTCTCACAGACTTCTGGTTTACGAGTTCATGCCCAACGGCGCTCTTAGTTGTTACCTTCGCAAAGAAGGAGGGCCTAGTCTGAGTTGGGATGTTAGGTTCCGAATCGCCGTAGGAACAGCCAAAGGCATAGCTTACTTGCATGAAGAATGTCGAGACTGTATTATTCACTGTGATATCAAACCTGAAAACATCCTCTTGGACACAGATTTCACGGCCAAAGTTTCTGATTTCGGATTAGCGAAGCTCATGGGGAGGGATTTCAGTAGGGTTTTAGCAACAATGAGAGGCACTTGGGGGTATGTAGCACCAGAGTGGATTTCTGGGGTAGCAATCACCACAAAAGCTGACGTTTACAGCTACGGGATGACATTGTTAGAGCTGATCAGTGGTCGCCGGAATGTGGAGGCGCCGCCACAATCAGGCTGCGGCGAGGAGGCCGGAGAGAAGGAGAAATGGTTCTTCCCTCCGTGGGCTGCACGGCAGATAATTGAAGGGATTTGGACTGCAATACTTGACAAAAGGCTTGGGAATGCTTATAACATGGAGGAGGTAAGGAGGGTGGCTATGGTGGCTGTGTGGTGCATTCAGGATGAAGAAGAAAGCAGGCCTCCGATGGGGATGGTGGTGAAGATGTTGGAGGGGTTAGTGCAAGTAAGTGTACCTCCCACGCCTAAATTGCTTCAAGCATTGGTCTCCGGCGAGTCCTTTCGGGGTGTCAGGGCAGATTCCAGCACGGGCGGCAGTATCTCCGGTGGCGGCAATGCTGATACAGAATCATTCACGGGCGGCTTTTCTTCCCCGGCAAATACGAATGTGAATGTTGTTGTTCAATGA 2520 0.4968 MSLLSSPSSSSAIPFSLFFLCLLAFSSSQPNSSSRGRKLQANRVLLRANETLPSENRTFDLGFFSFNAGQPNYYLAVRYASIPLPTYVWVANREKPSKNLTDSTLEITETGLLVVKDSPTSILWHSTNLGTSGRVELKLLESGNLVLLTREGSVSWQSFDFPTDAWLPGMNLTRNRSLLSWRSPTDPSPGLYSLRLRPPGYGEFELLFNNSKSYWTTGRWTGDSFLNIPEMMIPYLYQFDFSNPFTPTASFGFREKPLNGLSPPTYFRVEPHGQVRQYTWWSQTGSWNIFWSGPKNVCDVQDLCGSLGVCKGETTTMCECVSGYKPLDDGGWASGDYSGGCHRKADSPCDKNDGFVDMGVMSFEAPNVQSFKTKSRSSCETNCLNSCDCIGSSFNQRTGSCQNFYGSILNLRNSSSETSIDGNLFVRVQRGESEKKLNRQTLIGTIIGVIAFLGLIVATLLVLLNRRRKKKKLEEDGLIPVLNLQLFSYKELQLATRGFSEKIGHGGFGTVFQGELPDSTRVAVKRLERPGGGEKEFRAEVSTIGNIQHINLVRLRGFCSENSHRLLVYEFMPNGALSCYLRKEGGPSLSWDVRFRIAVGTAKGIAYLHEECRDCIIHCDIKPENILLDTDFTAKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELISGRRNVEAPPQSGCGEEAGEKEKWFFPPWAARQIIEGIWTAILDKRLGNAYNMEEVRRVAMVAVWCIQDEEESRPPMGMVVKMLEGLVQVSVPPTPKLLQALVSGESFRGVRADSSTGGSISGGGNADTESFTGGFSSPANTNVNVVVQ 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0139 839 Pfam D-mannose binding lectin 86 176 IPR001480 -
Alju11g0139 839 Gene3D - 33 159 IPR036426 -
Alju11g0139 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 220 IPR036426 -
Alju11g0139 839 PANTHER OS07G0415500 PROTEIN 10 787 - -
Alju11g0139 839 Gene3D Phosphorylase Kinase; domain 1 462 571 - -
Alju11g0139 839 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Alju11g0139 839 SMART blect_4 43 162 IPR001480 -
Alju11g0139 839 ProSiteProfiles Protein kinase domain profile. 497 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0139 839 CDD STKc_IRAK 503 777 - -
Alju11g0139 839 MobiDBLite consensus disorder prediction 803 826 - -
Alju11g0139 839 SUPERFAMILY Protein kinase-like (PK-like) 480 775 IPR011009 -
Alju11g0139 839 ProSiteProfiles Bulb-type lectin domain profile. 37 160 IPR001480 -
Alju11g0139 839 FunFam S-receptor-like kinase 5 572 783 - -
Alju11g0139 839 ProSiteProfiles PAN/Apple domain profile. 349 429 IPR003609 -
Alju11g0139 839 FunFam Receptor-like protein kinase 4 460 571 - -
Alju11g0139 839 SMART serkin_6 497 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0139 839 Pfam S-locus glycoprotein domain 215 326 IPR000858 GO:0048544
Alju11g0139 839 PIRSF SRK 8 828 IPR024171 GO:0004674
Alju11g0139 839 CDD B_lectin 43 162 IPR001480 -
Alju11g0139 839 Gene3D Transferase(Phosphotransferase) domain 1 572 782 - -
Alju11g0139 839 Pfam Protein kinase domain 500 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0139 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0139 Alju-ChrAlju11 1361612 1364131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0139 487 784 Receptor kinase-like Gene Family AT5G20050 45.806 8.80e-78 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju11g0139 Pkinase 5e-45 CL0016