Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0138 ATGCTTGGTAATGGGAAATCAGTGGATTTGTATAAGCTCTTCAAGGTTGTTAAGGAGAACGGTGGGTATGACGTAGTCTCCAAAAACCGTTTATGGGATCTGGTGGGTGAACAATCTGGGTTGGGTACGAGCATTGGTTCATTTGTGCAACTGATTTACAATAAGTACTTGATTACTTTAGAGATATGCCTAAAGCAAGCTGCTGATAATAAGGTCTCTGACTGTAGTCTGGAGTTTAACAGAGTTGATTTTGGCAGGCATTTGATGGAGTTGCACGCAGAATTTGAGGGGTCCTTGTCAGATTGTACTGATGAAGAGTTGGGAGATGACATGTGTCATTCTGAGTTTAAAACTCAGTATAAACGCCAGGATGGTGAGGTGTTGTTCGATGCTAAGGGAGTGAAGAGCAGGTCTGTAGGGGCCAAAAAAGTTCGGAATGGAGGATTGTTTGATTTGAACATACCAGGGTTTGAGTTGAATGAACTCCCAACAACAATTGAGTTGAATGAACTCAGTTCAGGAAATTTGTGCATTAAGAATGAGGTAAACAAAATGCCCATATTATCGGATGGAGGCAAGAGATGTTTCGATGATGATGATGTTTTGATATTGGACCCATCTGATGTAAATGAAGAGAGCTTTAATCGTAAAAGGAAGAGGGAGTCTATGCAGGGAATGCTAAGCTGGTTGACTGGCATTGCAAAGAATCCCTGTGATCCTGTTGTTGATTCGATACCTGAAAAATCAAAGTGGAGGTCTCACAGCAAAGAGAAGGTCTGGAAGCAGGCTTTGTTGTTTCGTGAGGCCGTTTTTCTGAAGCGACATGCTGAGTCAAGCAGTGAACAACTGAATTGGCAGAGGCAAAAAATGCATCCTTCCATGTATGAAGATCAGCTTGAGGCAACGTACAATTTTAGGGAGAGGGGCAAATGTACCAAGAAGCCTTTATTTGAAAAATCTAAGTCTGTAAGAGTCTCTTCGGATTCATCCATGGAAACCAAGGCTAATCTGGAGAGAACTTCAAGTCCTCACAATGAAGATTCTGCTGAGAAAAATCTGCCTGATTCCTCTGCTTCACCATCAGGTCTTGACAAATGCAGCACAGTTCCCATCCCTCTCGGGCCAATTCATCAAGCTAAAGTACCAGAATGGACTGGCATGACTTCTGAAAGTGATTCCAAGTGGTTGGGGACCCGAATATGGCCTTCAGAGAGAGTGAATCATAGACTCCTGATTGAGAGGGATCCCATTGGCAAGGGAAGACAGGATTCATGTGGCTGCCAAGTACCAGGTTCTGTTGAATGTGTCCGATTTCACGTTGCTGAGAAAAGGGTCAAGGTGAAGCTGGAATTAGGTGCGGCCTTTTACCTGTGGAATTTAGATAAGGTAGGTGAAGATGTTAGGCAGTCGTGGACAGTGGATGAAGAGAAGAAGTTTAAGGATGTGGTGCGATCAAATCCTCCATCACTAGAGAAATACTATTGGGATCATATTTTTAAATCATTTCCTAAGAAGACCAGGGAAGATTTAGTTAGCTACTATTTCAATGTCTTTCTTTTGCAGCGCCGAGGATATCAGAACAGGAGTACTCCAAATGAAATTGATAGTGATGATGAAGAATCAGAATTTGGACCTTTGAGGAATGTTTTTGGACAGCAAGCACAGAAGCCAACCAGTTCCATCTTACTAACCCCCAAAAAGTCTCAGATAAAGAACAAATAG 1722 0.4245 MLGNGKSVDLYKLFKVVKENGGYDVVSKNRLWDLVGEQSGLGTSIGSFVQLIYNKYLITLEICLKQAADNKVSDCSLEFNRVDFGRHLMELHAEFEGSLSDCTDEELGDDMCHSEFKTQYKRQDGEVLFDAKGVKSRSVGAKKVRNGGLFDLNIPGFELNELPTTIELNELSSGNLCIKNEVNKMPILSDGGKRCFDDDDVLILDPSDVNEESFNRKRKRESMQGMLSWLTGIAKNPCDPVVDSIPEKSKWRSHSKEKVWKQALLFREAVFLKRHAESSSEQLNWQRQKMHPSMYEDQLEATYNFRERGKCTKKPLFEKSKSVRVSSDSSMETKANLERTSSPHNEDSAEKNLPDSSASPSGLDKCSTVPIPLGPIHQAKVPEWTGMTSESDSKWLGTRIWPSERVNHRLLIERDPIGKGRQDSCGCQVPGSVECVRFHVAEKRVKVKLELGAAFYLWNLDKVGEDVRQSWTVDEEKKFKDVVRSNPPSLEKYYWDHIFKSFPKKTREDLVSYYFNVFLLQRRGYQNRSTPNEIDSDDEESEFGPLRNVFGQQAQKPTSSILLTPKKSQIKNK 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0138 573 MobiDBLite consensus disorder prediction 529 573 - -
Alju11g0138 573 Pfam Myb-like DNA-binding domain 468 517 IPR001005 -
Alju11g0138 573 CDD ARID 4 61 - -
Alju11g0138 573 SMART ELM2_2 371 422 IPR000949 -
Alju11g0138 573 SUPERFAMILY ARID-like 4 74 IPR036431 GO:0003677
Alju11g0138 573 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Alju11g0138 573 SMART bright_3 2 66 IPR001606 GO:0003677
Alju11g0138 573 MobiDBLite consensus disorder prediction 551 573 - -
Alju11g0138 573 CDD SANT 470 518 IPR001005 -
Alju11g0138 573 Pfam ARID/BRIGHT DNA binding domain 4 60 IPR001606 GO:0003677
Alju11g0138 573 MobiDBLite consensus disorder prediction 321 369 - -
Alju11g0138 573 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 568 - -
Alju11g0138 573 Gene3D - 1 75 IPR036431 GO:0003677
Alju11g0138 573 SMART sant 467 520 IPR001005 -
Alju11g0138 573 MobiDBLite consensus disorder prediction 322 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0138 Alju-ChrAlju11 1334363 1340246 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Alju11g0138 ARID 8.8e-09 CL0123