Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0127 ATGGCTGTGGTGAGTCCCGTGCCTGCAATTCCACGAAGTTACAGTTCTGTGAGGTCGCCTCAAGATTTTGGGGTCACCGGCAACATGTTTGGGATGGGAGAAATTGTGGAGGAGCCTAACACAAGTGTGGTTAATGATACTATCTATGTTGCTGTGGCAAAACACTTGAAAGAGGGCAAGTCAAATCTGACATGGGCAATACAAAACTCTGGAGGAAACAAGATTTGCATCCTCCATGTTCATGTTCCTGCAACTATGATCCCCCTGATGGGCACTAAATTTCCAGCAAGTTCATTGGAAGAACAGGAAGTTGAAGCATACAGGGAACTTGAGAGGCAAAACATGCACAAGAATCTAAATGAATACCTTCTCTTCTGCTCACGCATGGGGCTCCGTGCAGAGACGTTGCATATGGAAATGGAATCCATTGAGAAAGGTATTGTAGAGCTTGTCTCTCAGCATGGTATCCGTAAGCTTGTCATGGGGGCAGCATCTGATAATCGGCATTCTAGGAAAAGGATTGACCTCAAATCTAAGAAAGCCATGTACGTGAGTAAACATGCTCCAGCTTACTGTCGAATATGGTTTGTCTGCAAAGGGCGTCTTATACACGCTAGGCCAAACCCTGAAGGTTTGTTTTCACCTCAGTTGAGGTCTCAATCTGTTACAATGGGACAGAATAATAGGGAAAAGCTTGAGTTACTTCCCAGAGCAAGGTCTGCCATGTCTGGGCATGAACGGAGAACAGTAACTTTTTCTTCTCAAGACACTGAAAGGTTTACCAGTCCAAGTAACAGATCGGGTACAGAAAGTAGTACTGATGGGTCAGGGTTAAGAAAGAGTCCTTCAGTTTTCTCGACATGTTCTGAAACTGGTGCTGTTGAAGCAGTAGCATTGACTCCAAAATTGATTTATGAGGGGAGTGAGATTTTAATAGACTCAAGTGAATTTTCTCCAGTTATAGCAAATCTCCATCGTTCATCTCCTCCTAGTGTACTGGATGGAGGAATAATGGATGACACTCTCTACTATCAACTTAAAGTAGCCATGTCTGAAGCTGAGAATGCTAGACGGGAAGCCTTTCAAGAATCACTTAAGCGTGGGAAGGCTGAAAAAGATGCACTTGAGGCTATGCGGAGGGCTAAAGCCTCTGAAAGCTTGTATAAAGATGTACTCAAACAAAGGAAACAAGTCGAGGAAGCACTAGAAAAAGAAAGAGAAGAACTTGAAGGGATGAAGAGCGAGAGAGACAAAGTTAAGAAAGAACTTGGACTTGCCTTAGATCAAAAGCTGTCTTTGGAGAATCAAATTGAATCATCTGAATTCATGGTAAGGGAGTTAGAACAGAAGATTCTATCTGCTGTGGATCTGTTGACAAAATGCAAGGAAGAAAGAGATGAGTTACAGATGCAGCGTGATGATGCATTGAAGGAGGCCGAGGAGTTGAGGAAAAAACAAGGACAGGTTTCAAGCATACATGGGCCTGAGTCTTTTTCAAAGTTCTCTTTTCAAGAGATTGAACAAGCAACAAGGAACTTCAATTCATCCCTAAAGATTGGAGAAGGGGGATATGGAAATATCTATAAAGGTACCTTGCGCCAAAACGAAGTGGCCATAAAGATGTTGCATGCAGACAACTCCTCTCAAGGACCTGCAGAGTTTCAACAGGAGGTTGATGTGTTAAGTAAGTTAAGACATCCCAACCTTATTACACTCATAGGAGCCTGCCCAGAATCCTGGACTCTTGTCTACGAGTATCTACCAAATGGAAGCCTCGAAGATCGGCTCAATTGCAAGGATAACACAGCTCCACTTTCATGGCAAACTCGAATCCGGATTGCTACTGAGCTCTGCTCTGCTCTCATCTTCCTTCATAGCTCTAGACCTCACTCCATAGTGCATGGAGATTTGAAACCCTCAAATATTCTACTTGATGCAAACTTTGTTAGCAAGCTTAGTGACTTTGGAATTTGCCGTATATTATCCAATACTGAGACTTCAGGTGATGATGATACTACAGACTGTTGGAGAACTGTTCCAAAGGGCACTCTAGTCTACATGGATCCTGAGTTTCTTGTTTCTGGGGTTCTTACGCCAAAATCAGATGTTTATTCATTTGGTATCATATTATTAAGATTGTTGACTGGGAGACCAGCCTTGGGCATAACAAAGGATGTTCAATACGCATTAGATAATGGAAAGTTTAAATCTCTCTTGGATCCTTTGGCTGGAGATTGGCCATTTGTGCAAGCTGAACAGGTGGCTCATTTGGCTCTAAGGTGTTGTGAGTTGAAGCGAAAGAATCGGCCGGATCTTCGTTCAGATGCCTGGAAAATACTGGAAGCGATGAGTGTTTTTTCTGGAGGCACAAGTTCCTTTAAACCGAGTTATCAAGGGTCTGACCTACCTCCTTCATATTTTATTTGTCCAATCTTTCAGGAAATGATGGTAGATCCGAATATTGCAGCAGATGGTTTTTCGTATGAAGGTGAAGCTGTACGAGGATGGCTGCAGAGCGGCCATGACACGTCACCCATGACAAATGAAAAGCTTGGGCATCGTTATATTGTACCAAACCACACCCTTTGCAGTGCAATTCGGGACTGGCTACAAAAACACTGA 2622 0.4317 MAVVSPVPAIPRSYSSVRSPQDFGVTGNMFGMGEIVEEPNTSVVNDTIYVAVAKHLKEGKSNLTWAIQNSGGNKICILHVHVPATMIPLMGTKFPASSLEEQEVEAYRELERQNMHKNLNEYLLFCSRMGLRAETLHMEMESIEKGIVELVSQHGIRKLVMGAASDNRHSRKRIDLKSKKAMYVSKHAPAYCRIWFVCKGRLIHARPNPEGLFSPQLRSQSVTMGQNNREKLELLPRARSAMSGHERRTVTFSSQDTERFTSPSNRSGTESSTDGSGLRKSPSVFSTCSETGAVEAVALTPKLIYEGSEILIDSSEFSPVIANLHRSSPPSVLDGGIMDDTLYYQLKVAMSEAENARREAFQESLKRGKAEKDALEAMRRAKASESLYKDVLKQRKQVEEALEKEREELEGMKSERDKVKKELGLALDQKLSLENQIESSEFMVRELEQKILSAVDLLTKCKEERDELQMQRDDALKEAEELRKKQGQVSSIHGPESFSKFSFQEIEQATRNFNSSLKIGEGGYGNIYKGTLRQNEVAIKMLHADNSSQGPAEFQQEVDVLSKLRHPNLITLIGACPESWTLVYEYLPNGSLEDRLNCKDNTAPLSWQTRIRIATELCSALIFLHSSRPHSIVHGDLKPSNILLDANFVSKLSDFGICRILSNTETSGDDDTTDCWRTVPKGTLVYMDPEFLVSGVLTPKSDVYSFGIILLRLLTGRPALGITKDVQYALDNGKFKSLLDPLAGDWPFVQAEQVAHLALRCCELKRKNRPDLRSDAWKILEAMSVFSGGTSSFKPSYQGSDLPPSYFICPIFQEMMVDPNIAADGFSYEGEAVRGWLQSGHDTSPMTNEKLGHRYIVPNHTLCSAIRDWLQKH 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0127 873 Gene3D Transferase(Phosphotransferase) domain 1 587 787 - -
Alju11g0127 873 SMART Ubox_2 806 869 IPR003613 GO:0004842|GO:0016567
Alju11g0127 873 PANTHER OS02G0152300 PROTEIN 48 867 - -
Alju11g0127 873 FunFam receptor-like protein kinase FERONIA 476 586 - -
Alju11g0127 873 Gene3D HUPs 47 197 IPR014729 -
Alju11g0127 873 SMART serkin_6 513 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0127 873 MobiDBLite consensus disorder prediction 246 284 - -
Alju11g0127 873 SUPERFAMILY Protein kinase-like (PK-like) 494 773 IPR011009 -
Alju11g0127 873 Coils Coil 358 378 - -
Alju11g0127 873 Coils Coil 388 422 - -
Alju11g0127 873 Pfam Protein kinase domain 516 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0127 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Alju11g0127 873 ProSiteProfiles Protein kinase domain profile. 513 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0127 873 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 803 873 IPR013083 -
Alju11g0127 873 CDD STK_N 47 200 - -
Alju11g0127 873 Gene3D Phosphorylase Kinase; domain 1 483 586 - -
Alju11g0127 873 CDD RING-Ubox_WDSUB1-like 804 859 - -
Alju11g0127 873 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 63 171 - -
Alju11g0127 873 SUPERFAMILY RING/U-box 802 873 - -
Alju11g0127 873 MobiDBLite consensus disorder prediction 238 284 - -
Alju11g0127 873 ProSiteProfiles U-box domain profile. 802 873 IPR003613 GO:0004842|GO:0016567
Alju11g0127 873 ProSitePatterns Protein kinases ATP-binding region signature. 519 540 IPR017441 GO:0005524
Alju11g0127 873 Pfam U-box domain 804 873 IPR003613 GO:0004842|GO:0016567
Alju11g0127 873 Coils Coil 430 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0127 Alju-ChrAlju11 1180573 1184728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0127 1 873 U-box Gene Family AT2G45910 52.005 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Alju11g0127 Pkinase 1.9e-43 CL0016