Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0113 ATGGGGATTCAGTGCTCCAGACTCCTGCCATGTTGTGTGAATTCTCAAGTAAAGGCTTCCGTTCTTGAAGCTCCAGATACTGAAAAGGAGGATAGAAGTGAGGCCACTAATTGGCCCGCATTCCGTGAATTTTCATTGGAGCAACTAAAGAATGCAACATCTGGTTTTGCTGTTGAGAATATTGTATCTGAACATGGAGAGAAGGCGCCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGGATTGCAGTCAAGCGCTTTAATAGAAATGCTTGGCCTGATGGCCGGCAGTTTTTGGAGGAAGCTAGATCTGTCGGTGAGCTCCACAACCAGCGATTAGCAAATTTGATTGGTTGTTGTTGTGAAGGTGATGAGAGGCTGCTTGTGGCAGAATTTATGCCAAATGAAACGTTGGCAAAACACCTTTTCCATTGGGAAACACAACCTATGAAATGGGCAATGCGATTAAGAGTTGTTTTCCATCTTGCACAAGCTCTAGAATATTGTACAGGAAAAGGGCGAGCCCTCTATCATGACCTTAATGCATACAGAGTTTTATTTGATGAGGATGGCAATCCTCGGCTTTCAACTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATTTGGCTTTTACCCCTCCAGAATATCTGAGAACCGGGAGAGTGACACCAGAAAGTGTAATATATAGTTTTGGCACTCTTTTGCTTGACCTTCTCAGCGGGAAGCATATCCCCCCAAGCCATGCCCTTGATTTAATTCGGGACAGAAATATTCAAATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCTGATGATGATGGAACTGAGTTGGTACGGTTGGCATCTCGATGCTTACAGTATGAACCTAGAGAAAGGCCAAATCCTAGATCATTGGTGGCTGCCTTGGCTCCTCTTCAGAAAGATACAGAGGTTTCTTCACATGTCTTGATGGGAATCCCACATGGTGATGCTACTTTTGCTTCGTTGTCCCCACTTGGTGAAGCATGCTCGAGGAAGGATTTGACTGCCATACACGAAGTTCTGGAAAATATTGGATATAAAGACGATGAAGGAGTGACAAATGAGTTATCTTTCCAGGTTTGGACTGATGAAATGCAGGAAACACTTAACAGTAAGAAAAAGGGGGATGTTGCTTTCCAGCAGAAAGATTTTAGAGTTGCAATAGAGTGCTACACACAGTTTATCGATGGTGGAATAGTGGTTTCTCCAACCGTCTATGCGCGGCGAAGTTTGTGTTATCTGGTCGGTGACATGCTGCAGGAAGCACTGAACGATGCGATGCAGGCACAAGTGATATCCCCTGTATGGCACCTAGCATCATACCTTCAATTTCTTGCCCTCTCTGGACTTGGTATGGAGGCTGAAGCTCAAGTAGCTCTGAAAGAGGGCACAGCTTTGGAAGCCAAGAGAAGTGAAACTTCCAGGCATAAGTGA 1479 0.4402 MGIQCSRLLPCCVNSQVKASVLEAPDTEKEDRSEATNWPAFREFSLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDGRQFLEEARSVGELHNQRLANLIGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVVFHLAQALEYCTGKGRALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPRSLVAALAPLQKDTEVSSHVLMGIPHGDATFASLSPLGEACSRKDLTAIHEVLENIGYKDDEGVTNELSFQVWTDEMQETLNSKKKGDVAFQQKDFRVAIECYTQFIDGGIVVSPTVYARRSLCYLVGDMLQEALNDAMQAQVISPVWHLASYLQFLALSGLGMEAEAQVALKEGTALEAKRSETSRHK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0113 492 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Alju11g0113 492 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Alju11g0113 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 18 486 IPR045845 GO:0004672|GO:0009742
Alju11g0113 492 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Alju11g0113 492 SUPERFAMILY Protein kinase-like (PK-like) 34 317 IPR011009 -
Alju11g0113 492 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g0113 492 SUPERFAMILY TPR-like 385 487 IPR011990 GO:0005515
Alju11g0113 492 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Alju11g0113 492 Gene3D Tetratricopeptide repeat domain 381 491 IPR011990 GO:0005515
Alju11g0113 492 FunFam probable serine/threonine-protein kinase At4g35230 381 490 - -
Alju11g0113 492 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0113 Alju-ChrAlju11 1067786 1073434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0113 10 331 Glycoside Hydrolase AT3G07070 33.714 3.61e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Alju11g0113 PK_Tyr_Ser-Thr 1e-26 CL0016