Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0083 ATGGAGATTCCTCATCTAAACCGCCTTGCCCAACATTCCTCTTGGACAAGAGCGTACGCTAGCGTGAGGACTCAACCTCATCGTATTGCAAAGGTTTTCTTTTGCCAGGCGAAAAATGATGGGTCATTAAAGTCGGTGCCTCCAACCCTGTTAGCAGCAGAAAAGGAAGAAGCAAAGGCTGTATTAACCTTGTTTTTGAAAAAACAAGGCTTGAGTAATGCAGTTGCAGCAAGAACCATCAACAAGTCAGATGTGTTCATCGATCACCTTGTATCAAAGATTCACTCTAAACATAAATCTCGGTACCTCGTAGGAAGAGAACTTACAACTCTTGAGATTAGAGATGCTTTGATTCCTTATCTTGAATTCCTTTTTGAAGAATATGGAGACATTTTGATGGATTTTGTGGAAAACTATCCAAACCCTCCTGTCAAGGAAAAGCCTACAGCGCCAATTTCTATCCCTAGTTCATTGGTGGAATCAAAGAAGATGAAAGCGATGTCTCGAGTGAGTGAGATAGACCCAGCTGGCAAGCTTCGTCCTCATTTTGTCTATCTATTGGAGCTTGGCATGAGTATTGAGCAAATTAAGAGTATTACTCGAAAATTTCCGTCCTTTGCCTATTATAGCTTAGAAGGAAAAATCAGACCAGTTGTTGAGTTTCTTTTAGAACTTGGAGTTCCAAAAGAAGATATTCCCATCATTCTCACTAAAAGGCCTCAATTATGTGGTATCAGTCTCTCTGAGAATCTCAAACCCTCCATGAAGTTCATGGAAACCTTGGGTGTAGACAAGCAGCAATGGGCAAAGGTGATATACAGATTTCCAGCTCTTTTAACTTATAGCAAGCAAAAGGTGAAAACAAGTATAGATTTCCTCTATGAAATAGGTCTCTCAGAGGAGAACATAGGTAAGATCCTAACCCGCTTCCCCAACATCATCAGTTACAATGTGGAAGACAAGCTAAGACCAACAGCAAATTATTTTCGTTCCTTGGGAGTTGATGTTAGCATTCTTCTATTTCGGTGTCCACAAAATTTTGGTCTTAGCATTGAGGCCAATCTAAAGCCTGTGACAGAATTTTTCTTAGAGAAGGGATACACAGTGCAGGAAGTTGGGACCATGATTTCAAGATATGGATCATTGTATACATTTAGCTTGGCTGATAACTTGATTCCAAAATGGGAATTCTTTGTGACCATGGACTACCCCAAACCAGAGCTGGTTAAGTTCCCTCAGTTTTTTGGTTACAGTTTGAAAGAGAGGATTAAACCAAGATATGCTCGAATGAAAGAGTGCAGAGTGAGGCTGCTGCTAAACCAACTTCTGTCTCTGTCAAGTAGTGACTTTGGGGAGGCCTTGAAAAAGAAAATGAAGAAAAATCAGCTTGACGAGGATTCTAGTTGTAATGCCAAACATGGTCAACCGCCCAAGGAAAAATGA 1443 0.4061 MEIPHLNRLAQHSSWTRAYASVRTQPHRIAKVFFCQAKNDGSLKSVPPTLLAAEKEEAKAVLTLFLKKQGLSNAVAARTINKSDVFIDHLVSKIHSKHKSRYLVGRELTTLEIRDALIPYLEFLFEEYGDILMDFVENYPNPPVKEKPTAPISIPSSLVESKKMKAMSRVSEIDPAGKLRPHFVYLLELGMSIEQIKSITRKFPSFAYYSLEGKIRPVVEFLLELGVPKEDIPIILTKRPQLCGISLSENLKPSMKFMETLGVDKQQWAKVIYRFPALLTYSKQKVKTSIDFLYEIGLSEENIGKILTRFPNIISYNVEDKLRPTANYFRSLGVDVSILLFRCPQNFGLSIEANLKPVTEFFLEKGYTVQEVGTMISRYGSLYTFSLADNLIPKWEFFVTMDYPKPELVKFPQFFGYSLKERIKPRYARMKECRVRLLLNQLLSLSSSDFGEALKKKMKKNQLDEDSSCNAKHGQPPKEK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0083 480 MobiDBLite consensus disorder prediction 459 480 - -
Alju11g0083 480 Pfam mTERF 188 365 IPR003690 GO:0003690|GO:0006355
Alju11g0083 480 Pfam mTERF 295 450 IPR003690 GO:0003690|GO:0006355
Alju11g0083 480 Gene3D Transcription termination factor 3, mitochondrial 240 461 IPR038538 -
Alju11g0083 480 PANTHER CGI-12 PROTEIN-RELATED 161 454 IPR003690 GO:0003690|GO:0006355
Alju11g0083 480 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Alju11g0083 480 SMART mt_12 197 228 IPR003690 GO:0003690|GO:0006355
Alju11g0083 480 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Alju11g0083 480 SMART mt_12 373 404 IPR003690 GO:0003690|GO:0006355
Alju11g0083 480 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Alju11g0083 480 SMART mt_12 304 335 IPR003690 GO:0003690|GO:0006355
Alju11g0083 480 SMART mt_12 269 299 IPR003690 GO:0003690|GO:0006355
Alju11g0083 480 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju11g0083 mTERF 1.5e-20 No_clan