Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0062 ATGAGTTGCAAGGCTCCCAAGAGTCAGAGACAGAGATCTGCATTTGATCGCAAGGCTGGTCTTTGTTTCTCAGAAGTTTTCATAATAGAGAACAAGATGAAGAAGCAGGTTTTCATGTGGTGGTTTGGAATCATGACTGTGCAACTCTGCTTCCTGCTGGCTGCTTCTTCTGGTGACAAAGTATCATCAGATAGTAGTAGTGCGGTTAAGCTAAACACACAAGATTCAGAGCAAGTGGTCATTGACAATGGCATTGTCCAACTCACTATTTCCACACCTCAAGGCTATGTTATTGGAATCTCATACCATGGAATCGACAATGTCCTAGAATCTCGTCTAGCACTACACGACAGAGGGTATTTTGATGTAGTTTGGAATGAACCACGAAAGAATAGTATTACTCAAAGAATCAATGGGACCCATTTCTCAATTGTAGCATCGGATGAGAGCCAAGTGGAGGTTTCGTTTGTGAGAACATGGAATTCCTCAATGCAAGGCACTGATGTGCCCATTAACATAGACCAAAGGTATGTATTGCGACGAGGCAGTTCTGGATTTTACTCTTACGTGATATTCGAGCGTCCACAAGGATTCCCAGCTGTCGAGGTTGATCAAGTCAGGATTGTCTACAAGCTTCAAGAACACAGGTTTAATTATATGGCTGTATCAGACAATAGGCAAAGGTTCATGCCAACCATGCAAGACAGAGAGAGTGGGCAAGTCCTGGCTTATCCTGAGGCTGTTCTCTTAACCCACCCATCCAACAAAGACTTCAAAGGAGAGGTGGACGACAAATATCAGTACTCATGTGAGAACAAAGACAACAGAGTCCATGGTTGGATTAGCTTTGATTCAGATGCACCTGTTGGCTTCTGGATGATAACACCTACCAACGAGTTTCGCAATGCTGGACCCACCAAGCAAGACCTCACCTCTCATGTGGGCCCCTTTACCCTTTCGATGTTTATGAGCACCCACTACGCTGGGAAGGAGGTAACCATGGCGTTTCAAGAAGGGGAGACCTATAAGAAGGTTTTTGGGCCTGTTTTTGTGTATCTGAACTCTCTTTCAAGCAATGAGGATCCAAAGACGCTTTGGCCAGATGCAGTGCAACAGATGTATAAGGAAGCCCAAAGATGGCCATATGATTTCGCACATTCACGAGACTTCATTCCATCTACTCAACGTGGAAGTGTGGTTGGAAGATTACTAGTTCAAGATCGGTATATCCGAGGAGGGAGCCTTCTATATGCTAAATCTGCTTATGTTGGTCTCGCTCTACCCGGTTCTGAAGGATCATGGCAAACAGAAAGCAAGGGCTATCAGTTTTGGACACAAGCTGATAACAAGGGCTATTTCATGATTAAGAATGTTATACCAGGGGACTATAACTTGTTTGCTTGGATTCCTGGCTTTATTGGTGATTACAAATATAATAACATAATCACTATCACGCCAGGGTGTTTAATCAAATTGGATTCACTTGTATTTAATCCTCCAAGAAGTGGTTCTACCCTTTGGGAAATTGGATTTCCAGATCGCACAGCCGCAGAATTCTATATCCCAGACCCTAGCCCTAAACTCATCAACAAATTCTACAGTGAACAACCTAAAGACATGTTTAGGCAATATGGGCTGTGGGAACGTTATGCTGATTTATATCCACATAAGGATCTAGTTTACACTGTTGGTGTTGATAGGTATGATCGAGACTGGTTTTACGCTCATGTTACAAGGAGAATAGGAAATGGAGTATATCATCCAACTACATGGAAAGTTATATTTGAACTTGAGAATGCATTCACTGGAAGTTATACTCTACAATTAGCCCTAGCATCAACCACTCATTCTCAATTGCAGGTTTGGGTGAATGAGGAAGGTGATAATATTCCTCCATTATTTGAGAGAGTAGATTTGGGAGGAGATAATGCAATAGCAAGGCATGGAATCCATGGATTATACTGGTTGTTTAGTATTGATGTTCCAAGCGATCGTTTAGTGAGAGGAACAAATACTATTTATTTAAGACAGTCAAATGCCACTAATGCTTTCCAGGGGGTTATGTATGACTATATTCGTTTAGAAAGACCTCCAACTCTAAAGCCTTGA 2109 0.422 MSCKAPKSQRQRSAFDRKAGLCFSEVFIIENKMKKQVFMWWFGIMTVQLCFLLAASSGDKVSSDSSSAVKLNTQDSEQVVIDNGIVQLTISTPQGYVIGISYHGIDNVLESRLALHDRGYFDVVWNEPRKNSITQRINGTHFSIVASDESQVEVSFVRTWNSSMQGTDVPINIDQRYVLRRGSSGFYSYVIFERPQGFPAVEVDQVRIVYKLQEHRFNYMAVSDNRQRFMPTMQDRESGQVLAYPEAVLLTHPSNKDFKGEVDDKYQYSCENKDNRVHGWISFDSDAPVGFWMITPTNEFRNAGPTKQDLTSHVGPFTLSMFMSTHYAGKEVTMAFQEGETYKKVFGPVFVYLNSLSSNEDPKTLWPDAVQQMYKEAQRWPYDFAHSRDFIPSTQRGSVVGRLLVQDRYIRGGSLLYAKSAYVGLALPGSEGSWQTESKGYQFWTQADNKGYFMIKNVIPGDYNLFAWIPGFIGDYKYNNIITITPGCLIKLDSLVFNPPRSGSTLWEIGFPDRTAAEFYIPDPSPKLINKFYSEQPKDMFRQYGLWERYADLYPHKDLVYTVGVDRYDRDWFYAHVTRRIGNGVYHPTTWKVIFELENAFTGSYTLQLALASTTHSQLQVWVNEEGDNIPPLFERVDLGGDNAIARHGIHGLYWLFSIDVPSDRLVRGTNTIYLRQSNATNAFQGVMYDYIRLERPPTLKP 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0062 702 SUPERFAMILY Galactose mutarotase-like 73 357 IPR011013 GO:0003824|GO:0005975|GO:0030246
Alju11g0062 702 CDD RGL4_C 507 695 - -
Alju11g0062 702 FunFam Rhamnogalacturonate lyase B 392 492 - -
Alju11g0062 702 SUPERFAMILY Starch-binding domain-like 391 493 IPR013784 GO:0030246
Alju11g0062 702 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 70 698 - -
Alju11g0062 702 Gene3D - 391 488 - -
Alju11g0062 702 Gene3D - 502 695 - -
Alju11g0062 702 SUPERFAMILY Galactose-binding domain-like 502 695 IPR008979 -
Alju11g0062 702 CDD RGL4_N 72 355 - -
Alju11g0062 702 Gene3D - 71 370 IPR014718 GO:0030246
Alju11g0062 702 Pfam Polysaccharide lyase family 4, domain III 505 694 IPR029411 -
Alju11g0062 702 CDD RGL4_M 395 495 IPR029413 -
Alju11g0062 702 Pfam Polysaccharide lyase family 4, domain II 419 491 IPR029413 -
Alju11g0062 702 Pfam Rhamnogalacturonate lyase family 65 262 IPR010325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0062 Alju-ChrAlju11 702403 709028 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0062 65 699 Polysaccharide Lyase AT1G09910 54.389 0.0 718