Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0054 ATGTTAAGTACAGCCTCGTTACCGGCAGCTCTACCAGATTCCGCCGCAGACTCCTCGCCCCTTCTTCGTTACTCCGTCTCCGATCAAGTGCTCCGACGGACGTCGGGGCCATTACGGAGGGCGGCGCGGTTCTTCCGGCATGCGAGCGGCCGGCGGATGATGCTCCGGGAGCCGTCGGTGCGGGTGCGGGAAAACGCGGCGGAGCAGCTGGAGGCGCGTCAGAGTAACTGGGCGTTCTCGAAGCCGGTGGTGATTCTGGATGTCATTTGGAACTTGGTGTTTGTGATTATTGGGATTATCGTTTTAGGGTTGAGCGTTGAGGAGAAGCCTTCGGTGCCTTTGAGACTGTGGATTTGTGGGTACTTGCTACAAGGTGTGTTTCACTGTGTGCGTGTGATTCTTAAGTGCAGACGATACATGCCAGCCCAAGCACAAGCACAAGCTCGTTCTGCGTCCGAAGAACAGCATCAGTATGGGATCTCTTGGGAAAGAGGTTTAGATTTTAATTCTAGTTCTGGGAGTGATATTGGCGATTCTGCTGACGAACAGGATCAAGAAGGATATAGAAGGCGTATGGAATCAGCAAATACAATGTTTTCATTCATATGGTGGCTTCTTGGATTTTATTGGATTACCACTGGTGGCCAGAGCTTGACCCAAGATGTTCCTCAGCTTTACTGGCTCTGTATCACCTTCCTTGCCATCGACATTGTGATTGTTTTGGTCTGTGTGGTTGTGGCATGCCTTGTTGGTATTGCTGTTTGCTGCTGTCTTCCATGCATACTTGCATTTTTGTCAGTGGTGAGGGATAAGGAAGGGGCAACCGTGGAGGAAATCAATCGGTTGCCGAAATACAAGTTCAGGAGTGCAGATGAACATAATGCTGATGATGATGGTGATGCCCAAGCTTCATGTTGTAAAGGAATAATGACAGAATGTGACAGCGATACACCTGCAGAACATGCTCTTTGCAAGGAAGATGCAGAGTGCTGCATCTGCCTGTGTGCGTATGAGGATGGAGCTGAGCTAAGAGAACTTCCGTGCGGCCACCATTTTCACACGGACTGCATCGACAAGTGGCTGATCATCAACGCTAGCTGCCCTCTCTGCAAGTTCAATGTTCATACCGGAAACCATTCTCAAGTTTGA 1149 0.5013 MLSTASLPAALPDSAADSSPLLRYSVSDQVLRRTSGPLRRAARFFRHASGRRMMLREPSVRVRENAAEQLEARQSNWAFSKPVVILDVIWNLVFVIIGIIVLGLSVEEKPSVPLRLWICGYLLQGVFHCVRVILKCRRYMPAQAQAQARSASEEQHQYGISWERGLDFNSSSGSDIGDSADEQDQEGYRRRMESANTMFSFIWWLLGFYWITTGGQSLTQDVPQLYWLCITFLAIDIVIVLVCVVVACLVGIAVCCCLPCILAFLSVVRDKEGATVEEINRLPKYKFRSADEHNADDDGDAQASCCKGIMTECDSDTPAEHALCKEDAECCICLCAYEDGAELRELPCGHHFHTDCIDKWLIINASCPLCKFNVHTGNHSQV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0054 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 307 377 IPR013083 -
Alju11g0054 382 SMART ring_2 330 370 IPR001841 -
Alju11g0054 382 SUPERFAMILY RING/U-box 323 376 - -
Alju11g0054 382 ProSiteProfiles Zinc finger RING-type profile. 330 371 IPR001841 -
Alju11g0054 382 PANTHER TARGET OF ERK KINASE MPK-1 49 377 - -
Alju11g0054 382 Pfam Ring finger domain 329 371 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0054 Alju-ChrAlju11 604277 607033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0054 12 381 C3H Transcription Factor Family AT1G68070 43.236 4.70e-103 306