Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0051 ATGAGTTTTGTGGGTTTTCCAGATATTGCTCATTACAGCAGCAACGATTCTTGTAGAATGCCCTCTGGTGTAATCTCACAGCCTCGCCTTCTCACTTCCGCTCCCACAGCTAAAACCATGTTCAACTCTCCTGGCCTCTCACTTGCCCTTCAGACGGATATAGATGGGCAAAGGGATGGGAATATAATGTGTGAGAATTACGAGATGAATGTTAATGGGAGACGAAGCAGAGAAGAAGAGCAAGAAAGCAGATCTGAAAGTGATAACTTGGATGTTGCTTCCGGCGACGATCAAGACGCCTCCGATCACCCTCCCAGGAAAAAGCGCTACCACCGACACACCCCTCAACAGATACAAGAGCTTGAAGCTCTGTTCAAGGAGTGTCCTCACCCGGATGAGAAGCAGAGATTGGAACTGAGCAAGAGGCTTTGTTTGGAAACGAGGCAAGTTAAATTTTGGTTCCAGAATAGAAGAACTCAGATGAAGACCCAATTAGAACGCCATGAGAATACACTGCTCAGGCAAGAGAATGACAAGCTTAGAGCTGAGAACATGTCCATTAGGGACGCCATGAGGAACCCCATTTGCTCAAACTGTGGGGGACCGGCTATAATTGGAGAAATTTCACTCGAGGAACAGCATCTTCGGGTTGAAAATGCCCGGTTAAAGGAGGAACTAGACCGGGTTTGTGCCCTCGCCGGAAAGTTCCTCGGCCGCCCGGTTTCTTCGTACCCCAACTCAATGGCTCCTCCATTGGCAAACTCAAGTTTGGAGCTTGGAGTTGGAAGCAATGGATTTGGTGGTATAAGCGCTGTGCCTGCAACACTGCCCATTGGGCCAGACTTGGGTGTGGGTATTTCTAGCCCTTTAGCCGTGGGAACTCCTACTCATCCCGGCCCGGGCAGCTCCGGGGTGACCGGGATTGATCGGTCAACAGAGAGGTCAATGTTTCTAGAGCTTGCTTTGGCTGCCATGGATGAATTGGTGAAGATGGCTCAGACTGATGAGCCTCTATGGATGACTAGTTTGGAAGGTGGAAGAGAAATCCTGAACCATGAGGAGTACTCAAGGAGTTTCACACCTTGCATTGGCTTAAAACCTAATGGCTTTGTGTCGGAAGCGTCAAGGGAGACTGGAATGGTCATCATAAACAGCTTGGCCCTTGTTGAAACTTTGATGGACTCGAACCGTTGGGCAGAGATGTTTCCTCGTATGATTGCAAGAACTTCCCCTCCTGAAGTAATATCTGGCGGAATAAATGGGACCAGAAATGGTGCTCTTCAATTGATGCATGGTGAGCTGCAAGTACTATCGCCGTTGGTGCCGGTTCGGGAGGTGAGTTTCCTGAGGTTCTGCAAGCAGCATGCGGAGGGAGTGTGGGCTGTTGTGGATGTGTCAATTGATGGAGTCAGGGAAACTTGTGCTTCTGTCAACTGTAGGAGGCTTCCTTCCGGCTGTCTCGTTCAAGACATGCCTAATGGCTACTCCAAGGTGACATGGGTGGAGCATGCAGAATACGATGAAAGGCAAGTTCACGAGCTGTATAGAGGCTTGTTAAGTTCAGGCTTGGGTTTTGGCGCCCAACGCTGGCTTGCCACCCTCCAGCGTCAATGCGAATGCCTCGCCATTTTAATGTCATCCTCGCGAGACCATTCTGCGATCACTGCCGGCGGGCGGCGGAGCATGCTGAAGCTAGCGCAGCGCATGACTAACAACTTTTGCGCCGGCATTTGTGCCTCCACCGTGCATAAGTGGAACAAGCTTAATGCCGGCAACGTTGGTGAGGATGTCCGGGTCATGACTCGCAAGAGCGTCGACGACCCAGGGGAACCACCGGGGGTCGTGCTGAGCGCTGCCACCTCGGTGTGGCTGCCGGTATCGCCCCAGCGACTGTTCGATTTCCTACGCGACGAACGGCTCCGGAGCGAGTGGGACATTCTGTCGAACGGTGGGCCCATGCAGGAGATGGCCCACATTGCCAAGGGCCATGACCACGGCAACTGCGTCTCCCTCCTCAGAGCCAGCGCCATGAATTGTAGCCAGAGCAGCATGCTCATATTGCAGGAGACATGCATCGACGCGTCGGGGGCGCTCGTTGTGTACGCGCCGGTGGATATTCCGGCCATGCACCTGGTCATGAACGGTGGCGATTCAGCCTACGTGGCGTTACTCCCGTCGGGGTTCGTGATTGTGCCAGATGGTTGTGGTTCACGCGGGTCGCAAGGCGGCGGCAGAGGGAGTGGGTCACTCCTGACGGTGGCGTTTCAGATACTGGTGAATAGCCTGCCGACGGCGAAGCTGACGGTAGAGTCGGTGGAGACGGTGAACAACCTCATATCTTGTACGGTGCAGAAGATAAAGGCCGCGCTTCCATGTGAAAGCTGA 2385 0.5308 MSFVGFPDIAHYSSNDSCRMPSGVISQPRLLTSAPTAKTMFNSPGLSLALQTDIDGQRDGNIMCENYEMNVNGRRSREEEQESRSESDNLDVASGDDQDASDHPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPICSNCGGPAIIGEISLEEQHLRVENARLKEELDRVCALAGKFLGRPVSSYPNSMAPPLANSSLELGVGSNGFGGISAVPATLPIGPDLGVGISSPLAVGTPTHPGPGSSGVTGIDRSTERSMFLELALAAMDELVKMAQTDEPLWMTSLEGGREILNHEEYSRSFTPCIGLKPNGFVSEASRETGMVIINSLALVETLMDSNRWAEMFPRMIARTSPPEVISGGINGTRNGALQLMHGELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDGVRETCASVNCRRLPSGCLVQDMPNGYSKVTWVEHAEYDERQVHELYRGLLSSGLGFGAQRWLATLQRQCECLAILMSSSRDHSAITAGGRRSMLKLAQRMTNNFCAGICASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASAMNCSQSSMLILQETCIDASGALVVYAPVDIPAMHLVMNGGDSAYVALLPSGFVIVPDGCGSRGSQGGGRGSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALPCES 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0051 794 FunFam Homeobox-leucine zipper protein HDG1 94 180 - -
Alju11g0051 794 ProSiteProfiles START domain profile. 310 543 IPR002913 GO:0008289
Alju11g0051 794 Pfam Homeodomain 107 162 IPR001356 GO:0003677
Alju11g0051 794 CDD START_ArGLABRA2_like 314 539 - -
Alju11g0051 794 Coils Coil 158 190 - -
Alju11g0051 794 MobiDBLite consensus disorder prediction 69 114 - -
Alju11g0051 794 MobiDBLite consensus disorder prediction 71 105 - -
Alju11g0051 794 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 103 790 IPR042160 -
Alju11g0051 794 SUPERFAMILY Homeodomain-like 93 164 IPR009057 -
Alju11g0051 794 ProSitePatterns 'Homeobox' domain signature. 139 162 IPR017970 GO:0000981|GO:0006355
Alju11g0051 794 CDD homeodomain 106 164 IPR001356 GO:0003677
Alju11g0051 794 SMART HOX_1 105 168 IPR001356 GO:0003677
Alju11g0051 794 FunFam Homeobox-leucine zipper protein GLABRA 2 319 539 - -
Alju11g0051 794 SUPERFAMILY Bet v1-like 313 540 - -
Alju11g0051 794 SMART START_1 319 540 IPR002913 GO:0008289
Alju11g0051 794 ProSiteProfiles 'Homeobox' domain profile. 104 164 IPR001356 GO:0003677
Alju11g0051 794 Pfam START domain 319 540 IPR002913 GO:0008289
Alju11g0051 794 SUPERFAMILY Bet v1-like 565 787 - -
Alju11g0051 794 Gene3D - 93 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0051 Alju-ChrAlju11 589774 595237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0051 34 794 Homeobox Transcription Factor Family AT3G61150 68.164 0.0 1034
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju11g0051 START 3e-51 CL0209