Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0041 ATGGATAACGATGGCTCTCCAACTCCAAACCGATATCCCAACCAGCATCCGTACCCTTTATGGAATCACCCACGTTCAGGTTTAGATCCATATTCACGTCCTCCCTTGTGCACATATCCGTTCAGTAATCCTTCACATCGTCACCCTCCTCGTCCTCCCAGAGCTCCCACCTCATCATCGCCTCCTTCTGGTTCTGCAGAACACATTCGACCTGCTCCTGTTGGCTATTACAGCCCTCCTCCTTACACTTACCCTTACCCTTACCCACATTATCAACCTGCCCATAATGTTACTACTCCTCGAACTTCCTTTCGGCCCCCTTGTAATTTTCAGGGTTCACGTAGTTTCCGTTATTTTCCTACGGTTGAAGCACTTCCACCCGGGGAAGAAAATATCAAAAGTCATTCACGAGCTCGTTCCTATGCTGGCCCACTTGAGTCGCAGTCAGCAGGTGGAGCGTCGTCATTGCAAACTAAGGATTCTTCCAGCACTTCTGGTACGTCAGTTTGTCCACGATCTTTAGATGGTACTGTGATCAATGCTCGATTTCCCAATAACGGGCAATCTTCTCCTGCTAAATCTTCAGTCCAGCCCATGTTTCGGCATTCCAACTCGGTTTCAATTTTGAACCATGAAGGGGAGTTTTCTGGCCTTTGTCGGAACTCATCATTCTCGGGGTTGGGATCCTCCCGCTTTAATGAGTTGGATTCTCATTCTTCTGGATTTCAAGATCATCCGGGGTTGTTACATGAAAGTGTGCAGACTCAGAATCTGGATGTTGTTCCTGTCTCGACCAAAGGGCCCTTGAAAACATTGCTCCTGCATGGGAATTTAGAGGTATTGGTTCATGAAGCCAGAAATCTTCCAAATATAGATTACTTCCGCAGGACATTTGCGGGGATGTTGTGCAAATTCCCTCGGAACTTGGAAGGAAAGATCACTATTGATCCTTACGTGATAATATCAATATCAAATGCTATAATTGGGAGGACTTTTGTGATTAACAACTGTGAAAATCCTAATTGGATGCAACATTTTAATGTTCCCGTTGCACATTATGCTGCTGAAGTGAACTTCCTTGTTAAAGATAATGAAATAGTGGGCTCACAAATTATAGGCAATGTGGCGATTCCGGTGGAACAAATTTACTCAGGTGCAAAAGTAGAAGGCACTTACCCTGTCCTGAATTCTTACGGGAGGCCTTATAAGCAGGGTACTACCTTGACCCTATCCATACAGTACTTTCCAATTGAGAGGCTAAGCCATCATTATCAAGGAATTGACTCAGAACCTGACTGCACTGGCGTTCCTGGCACATATTTTCCTCTTAGGAAAGGTGGATCTGTTACTCTATACCAAGATGCCCATGTTCCTGATGGTTTACTGCCTCTTGTGATGCTTGACGGAGGGAAATATCATGTTCATGGAAAGTGTTGGGCTGATATCTTCAATGCCATACAGCAAGCCCGGCGTTTGATTTATATTACAGGGTGGTCGGTGTGGCATCAAGTTAGGTTGGTGAGGGATGGTGCTTATCAATCAGATTACACCCTCGGCGATCTTCTCAAGTCAAAGTCACAGGAAGGAGTAAGAGTTCTTCTCCTTATATGGGATGACCCAACGTCAAGGAAAATTTTGGGTTACAAGACAGATGGTGTAATGGCAACCCATGACGAGGAAACCCGTAGATTTTTCAAACACTCTTCCGTAAAAGTGCTGCTTTGTCCCCGTATTGCAGGAAAACGACATAGCTGGTACAAGCAAAAGGAAGTTGGAACCATATACACACATCATCAGAAAACTGTTGTTGTAGATGCTGATGCCGGAAATAACAAAAGAAAAATTATAGCGTTCGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATTTCCCCCACCATCCCCTCTTTCGGACACGCCATTCACTGCATAAGGATGACTATCACAACCCCACTTTTACGGGTAACACTGGTGGTTGTCCACGGGAGCCATGGCATGACCTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATATTCTGATCAATTTTGAGGAGCGATGGTTAAAAGCTACAAAACCTCAAGGGATTAAAAAGCTGAAAGCTTCTTACGATGATGCTTTACTTAAGCTGGAAAGACTTCCACAAATTGTTAGCCCGGCTGATATGGTTGCAGATGATAATGATCCCGATACTTGGCATGTTCAGATATTTCGGTCGATCGATTCGAATTCTGTTAAGGGGTTTCCAAAAGATCCCAAAAATGCAACAAAGAAGAACAACCTAGTATGTGGGAAGAATGTATTGATTGACATGAGCATACATATAGCATATGTGAAGGCCATTCGTGCGGCACAGCGTTTTATTTACATAGAGAATCAATATTTCATTGGCTCTTCGTACAATTGGAGTCATTATAAAGACCTAGGCGCTAATAACTTAATTCCAATGGAAATTGCCCTTAAGATTGCTGAAAAGATAAAGGCAAATGAGAGGTTTGCAGTGTACATTATTATACCAATGTGGCCCGAGGGTGTTCCATCCGGGTCTGCCACACAGAGGATTCTGTTTTGGCAGCAAAAAACAATGCAAATGATGTATGAGACAGTTTCAAAGGCTTTGGTTGAGGCTGGGCTAGAAGCAGCATTCGCTCCGCAGGATTATTTAAACTTTTTCTGTCTCGGAAATCGCGAAATCATTGATATGTATGATTACAGTAGTATGCTTGGAACTCCTCCTCCAGCAAATAGTCCTCAAGCATTTAGTCGAAATAGCCGCCGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGACGATGAGTACGTGATACTGGGGTCTGCAAACATTAATCAACGCTCTATGGAAGGAACAAGGGACACTGAGGTTGCAATGGGAGCCTACCAACCTAATTATACTTGGGCAAGACGACGTTCTTATCCACGTGGTGAGGTGCATGGGTATAGGATGTCACTTTGGGCTGAACACACAGGAACACTTGAAGAGTGCTTCTTACGGCCAGAGAGCCTTGAATGTGTAAGAAGGATCAGAACGATTGGTGAAATTAACTGGAAGCAATTTGCAGCGAATGAAATAACAGAGATGAGAGGGCACCTTCTCAAATACCCAGTTGAAGTTGATCGAAATGGTAAGGTCAGATCCCTTCCTGGCCATGAAGAATTCCCTGATGTGGGAGGCAGAATAGTTGGATCGTTTCTTGCAATCCAAGAGAATCTAACCATTTGA 3249 0.4386 MDNDGSPTPNRYPNQHPYPLWNHPRSGLDPYSRPPLCTYPFSNPSHRHPPRPPRAPTSSSPPSGSAEHIRPAPVGYYSPPPYTYPYPYPHYQPAHNVTTPRTSFRPPCNFQGSRSFRYFPTVEALPPGEENIKSHSRARSYAGPLESQSAGGASSLQTKDSSSTSGTSVCPRSLDGTVINARFPNNGQSSPAKSSVQPMFRHSNSVSILNHEGEFSGLCRNSSFSGLGSSRFNELDSHSSGFQDHPGLLHESVQTQNLDVVPVSTKGPLKTLLLHGNLEVLVHEARNLPNIDYFRRTFAGMLCKFPRNLEGKITIDPYVIISISNAIIGRTFVINNCENPNWMQHFNVPVAHYAAEVNFLVKDNEIVGSQIIGNVAIPVEQIYSGAKVEGTYPVLNSYGRPYKQGTTLTLSIQYFPIERLSHHYQGIDSEPDCTGVPGTYFPLRKGGSVTLYQDAHVPDGLLPLVMLDGGKYHVHGKCWADIFNAIQQARRLIYITGWSVWHQVRLVRDGAYQSDYTLGDLLKSKSQEGVRVLLLIWDDPTSRKILGYKTDGVMATHDEETRRFFKHSSVKVLLCPRIAGKRHSWYKQKEVGTIYTHHQKTVVVDADAGNNKRKIIAFVGGLDLCDGRYDFPHHPLFRTRHSLHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDILINFEERWLKATKPQGIKKLKASYDDALLKLERLPQIVSPADMVADDNDPDTWHVQIFRSIDSNSVKGFPKDPKNATKKNNLVCGKNVLIDMSIHIAYVKAIRAAQRFIYIENQYFIGSSYNWSHYKDLGANNLIPMEIALKIAEKIKANERFAVYIIIPMWPEGVPSGSATQRILFWQQKTMQMMYETVSKALVEAGLEAAFAPQDYLNFFCLGNREIIDMYDYSSMLGTPPPANSPQAFSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEVAMGAYQPNYTWARRRSYPRGEVHGYRMSLWAEHTGTLEECFLRPESLECVRRIRTIGEINWKQFAANEITEMRGHLLKYPVEVDRNGKVRSLPGHEEFPDVGGRIVGSFLAIQENLTI 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0041 1082 MobiDBLite consensus disorder prediction 1 74 - -
Alju11g0041 1082 Gene3D Endonuclease Chain A 737 981 - -
Alju11g0041 1082 SMART pld_4 928 955 IPR001736 GO:0003824
Alju11g0041 1082 SMART pld_4 593 628 IPR001736 GO:0003824
Alju11g0041 1082 MobiDBLite consensus disorder prediction 45 59 - -
Alju11g0041 1082 CDD C2_plant_PLD 270 415 - -
Alju11g0041 1082 FunFam Phospholipase D delta 469 707 - -
Alju11g0041 1082 PANTHER PHOSPHOLIPASE D 269 1073 IPR015679 -
Alju11g0041 1082 Gene3D Endonuclease Chain A 471 716 - -
Alju11g0041 1082 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 593 628 IPR001736 GO:0003824
Alju11g0041 1082 SMART C2_3c 277 391 IPR000008 -
Alju11g0041 1082 SUPERFAMILY Phospholipase D/nuclease 774 1014 - -
Alju11g0041 1082 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 928 955 IPR001736 GO:0003824
Alju11g0041 1082 SUPERFAMILY Phospholipase D/nuclease 436 693 - -
Alju11g0041 1082 MobiDBLite consensus disorder prediction 141 198 - -
Alju11g0041 1082 FunFam Phospholipase D 740 974 - -
Alju11g0041 1082 Pfam Phospholipase D C terminal 1002 1072 IPR024632 -
Alju11g0041 1082 Pfam Phospholipase D Active site motif 929 955 IPR001736 GO:0003824
Alju11g0041 1082 Pfam Phospholipase D Active site motif 594 628 IPR001736 GO:0003824
Alju11g0041 1082 Pfam C2 domain 276 394 IPR000008 -
Alju11g0041 1082 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 274 417 IPR035892 -
Alju11g0041 1082 Gene3D C2 domain 272 412 IPR035892 -
Alju11g0041 1082 ProSiteProfiles C2 domain profile. 257 392 IPR000008 -
Alju11g0041 1082 MobiDBLite consensus disorder prediction 126 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0041 Alju-ChrAlju11 430522 436585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0041 160 1082 Phospholipase D Gene Family (Wang group) AT2G42010 66.841 0.0 1298