Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0031 ATGGGGGTGGGAGGAAAATTCTGGGATTTGCTAAAGCCATATGGGCGAGCCGAAGGTTTGGATTTCTTAAGGGACAAGCGAGTCGCTGTGGACCTCTCCTTCTGGATTATCCAGCACCAGACTGCTATCAAGGAACATGCTCGGAAGCCCCATCTACGCCTTATCTTCTTCCGCACCATCAATCTCTTCTCCAAGTTTGGAGTATATCCTGTCTTCGTGGTAGATGGGACCCCATCGCCGTTGAAATCAAAGGCTAGGATTTCAAGGTTTTCCCGTTTTTCTGGCATTGTACTAAAAGATTTTCCGGTGGCTGAAGAAAGTGTTCCCGTTGAGAGGAACCGTGAATTTTCAAGGCATGTTCAAGAATGTGTGGAACTTGTGGAGTTACTTGGAATGCCTGTACTCTATGCTAAAGGAGAGGCAGAAGCACTTTGTGCCCAATTAAATAGTGAAGGTTATGTAGATGCTTGCATCACATCTGATAGTGATGCTTTTCTATTTGGCGCAAAATGCGTTATAAAGAGCTTCTGCACTAATGGCAAAGAAGCTTTTGAATGCTACAATATGGAAGATATTGAAGCTGGTCTTGGGTTGAAGAGGAAACACCTCATAGCTATTTCTCTTCTCGTTGGAAATGATTATGATTTAACAGGTGTTCAGGGGATTGGGCTTGATACAGCTCTTCGTTTTGTTAGATGTTTTACTGAAGAAGATGTATTGAATAGATTGCGACAGATTGGCAATGGGAAAGTTTCATCAGCTCCCGCCAGCATTAAATCTGCTGAAAATTGTGCTGACATGGATGGGAACTTTCCAAGCCGAAAACAACTTCATTGTTCCTTTTGTGGGCATCCAGGCAGCAAAAGAGATCATATGAAATCTTCTTGTGAATTTTGCATTACAAGTGAAGCTTGCTTGAGAAAACCAGAGGGCTTTACTTGTGGTTGCCCTTCCTGTGACATGATTAGGAAACAAAAGGGGCAGAGAAGGATGGAAAATTGGTATGCTAAAGTTTGTCTCAAGATTGCAGAGGACCTCAAATTTCACAGAGATGAAATTATTGAATTGTACTTATGCAATGACAATGGGGGCCATCCTGCAAGTGATGGTCCTTGCATTTCATGGAGTAGACCCAAGATTGAGATGCTGATAGATTTTTTAAAATTTCATCAGCACTGGGATCCATCTTACGTCCGACAGCAGATTTTCCCTATGATGTCTACCATCTTTTTGAGAGACATGGCTAATACTCCAGTAGAAAGTCTGGTATTTGGGACATTTGAGTTTGATTCAATACAACGTGTGAAGATAAGATATCGATATCAATTTTATGTTGTCAAGTGGAAACATGCAGTTGGCAACATTAGTCGTACAGTTCCAGCACATGAATCTAGCATGCAACAAGCAGATGTTAGTGAGCTTGATGAATTTGTGGATGTTCTAGATGATCCTAGTGTTTCTGATACGGGTGATGGGTGTAGCTTCCTGTTGACAGATGAAAATATGGATCTTGTGAGAGCTGCTTTTCCAGAAAAAGTTGAAAGCTTCTGGCAAGAGCAGGAATTGAAGGGATCGAAAATAAGAAAGAGTTGTACCCCACGATCTCTAGAGAAAGAGAGTAGTTCATCTTCATTAAACACAAGAAGTGATCAACTAAGCATTACAAATTTCTACCGCTCAGTGAAAACGCAAAACCATTCAAAACAGGAAGTGGCATCTGATGGCTCTGATAACCTTGACAGTGGGAAAAGAACAATGTCCTGTCCAAATCTCACTAAATCAGCAAGGCGTCGCCTTTTATTTAAGTAA 1809 0.4151 MGVGGKFWDLLKPYGRAEGLDFLRDKRVAVDLSFWIIQHQTAIKEHARKPHLRLIFFRTINLFSKFGVYPVFVVDGTPSPLKSKARISRFSRFSGIVLKDFPVAEESVPVERNREFSRHVQECVELVELLGMPVLYAKGEAEALCAQLNSEGYVDACITSDSDAFLFGAKCVIKSFCTNGKEAFECYNMEDIEAGLGLKRKHLIAISLLVGNDYDLTGVQGIGLDTALRFVRCFTEEDVLNRLRQIGNGKVSSAPASIKSAENCADMDGNFPSRKQLHCSFCGHPGSKRDHMKSSCEFCITSEACLRKPEGFTCGCPSCDMIRKQKGQRRMENWYAKVCLKIAEDLKFHRDEIIELYLCNDNGGHPASDGPCISWSRPKIEMLIDFLKFHQHWDPSYVRQQIFPMMSTIFLRDMANTPVESLVFGTFEFDSIQRVKIRYRYQFYVVKWKHAVGNISRTVPAHESSMQQADVSELDEFVDVLDDPSVSDTGDGCSFLLTDENMDLVRAAFPEKVESFWQEQELKGSKIRKSCTPRSLEKESSSSSLNTRSDQLSITNFYRSVKTQNHSKQEVASDGSDNLDSGKRTMSCPNLTKSARRRLLFK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0031 602 Pfam XPG N-terminal domain 1 89 IPR006085 GO:0004518
Alju11g0031 602 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Alju11g0031 602 Gene3D - 198 262 - -
Alju11g0031 602 CDD PIN_GEN1 2 202 - -
Alju11g0031 602 Gene3D - 5 197 - -
Alju11g0031 602 Pfam XPG I-region 131 213 IPR006086 GO:0004518
Alju11g0031 602 SMART xpgineu 128 198 IPR006086 GO:0004518
Alju11g0031 602 MobiDBLite consensus disorder prediction 528 548 - -
Alju11g0031 602 SMART xpgn3 1 96 IPR006085 GO:0004518
Alju11g0031 602 FunFam Flap endonuclease GEN-like 1 2 197 - -
Alju11g0031 602 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 543 IPR006084 -
Alju11g0031 602 MobiDBLite consensus disorder prediction 564 592 - -
Alju11g0031 602 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Alju11g0031 602 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Alju11g0031 602 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Alju11g0031 602 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
Alju11g0031 602 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 70 89 IPR006084 -
Alju11g0031 602 MobiDBLite consensus disorder prediction 564 602 - -
Alju11g0031 602 FunFam Flap endonuclease GEN-like 1 198 256 - -
Alju11g0031 602 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 413 IPR036279 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0031 26 232 Core DNA Replication Machinery Family AT5G26680 29.515 5.61e-17 81.6