Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0018 ATGCCTGACATTTCAAGGGTTTTTTGGGAATTTGAGTTGAAATTTCCACCGACGGCTCCTTCATTGCACGGCATTTTCTGGCAGTTTGGGTTTCCTGATTCATCGTTCCTAACAACAACCATGGTGGTTGAAGATGATAATCATGATGATGGTCGTTCAACAGAAGAATGGCTGTTTCAAGCACAAGAGCTTGTCCCTCTTGCTCTCGACAAGGCCAAGGAGGTTAAGAATTTCCCAGGAAGGTGGAAGATGATCATATCAAAACTTGAACAGATCCCGACTCGTTTGTCAGACTTATCTAGCCATCCATGCTTCTCCAAGAACGCTCTCTGCAAGGAGCAATTGCAGGCGGTCTCATCAATACTCAGAGAAGCCATTCATTTGGCTGAGCTTTGCGTGATGGACAATTACGAAGGCAAGCTCAAGATGCAGAGTGATCTCGATGCCTTGTCAGGAAAACTCGATTTGCACTTGAAAGATTGCAGCCTGTTGATCAAAACTGGAGTTCTCGGGGAGGCCACTCTGCCATTAGCAATATCATCAGAGGTTGATGTTTCAAGCAATATCAGGGAGTTACTGGCTCGCCTGCAGATCGGTCACTTGGAGGCGAAACACAGGGCTATAGAGAAACTACATGATGTGATGAAAGAAGATGAGAAGAGTGTTTTGGCAGTTTTAACACGTAGCAGCATTGCTGCTTTGGTTCAATTGCTCACTGCTACTTCTCCAAGGATAAGAGAGAAAACTGCCTCCATTATATGCAGTCTTGTAGAATCAGGAAGCTGTGAGAACTGGTTAGTTTCTGAAGGAGTTATTCCACCTCTGATAAGGCTCATTGAATCAGGAAGCGCCATCGGGAAAGAGAAGGCCTCCATAACCTTCCAGAGGTTGTCCATGTCATCAGAAACTGCTCGTGCCATTGTTGGGCATGGTGGGGTTCGTCCACTCATTGATCTCTGTCAGACTGGTGATTCTGTGTTACAGGCTGCTTGTGCTTGTACTTTGAAGAACATATCTGCGGTCCCTGAGGTTCGACAAGTCCTAGCCGAGGAAGGGATTGTTAAGGTAATGATCAGCCTCCTAAACTGTGGAATGTTGTTGAATTCCAAAGAGTATGCAGCTGAGTGCCTGCAGAATCTCACTTCAAGCAATGAGAATCTAAGAAGGCTTGTCATATCCGAAAATGGAATAAGAAGCCTTTTAGCTTATTTAGATGTTCCTCTTCCACAAGAGTCTTCAATGGGTGCCTTGAGGAACTTAGTAGGGTCTGTCTCTGAGCAATCTCTAGTTTCAATGGGTTTGCTTCCTCGCTTGGCTCATGTCCTAAAATCCGGGTCCATTGGAGCCCAACAAGCGGCTGCTTCCACAATCTGTAAAGTCTGCAGCTCAGGAGAGATGAAGAAGATGATTGGTGAGGCTGGGTGTGTGCCTCTGCTGGTGAAAATGCTGGAGGCCAAGTCTAATGGTGCAAGAGAGGTGGCTGCGCAAGCGGTTTCAAGCTTGATGGCGCTGTCTCAGAATCAGAGGGAGGTGAAGAAGAATGACAAGAGTGTGCCTAATCTTGTTCAGTTGCTTGATCCAAATCCTCAAAATACTGCAAAGAAATATGCTGTGGCATGCCTTGGATCGCTTTCTTCTAGTCACAAGTGTAGGAAACTGATGATCTCCTATGGAGCAATCGGCTATCTGAAGAAGCTCATTGAGATGGAGATACCGGGAGCCAAGAAGCTACTTGAGAGATTGGAAAGAGGGAAATTGAGAAGCTTGTTTAGCAGGAAATAA 1782 0.4579 MPDISRVFWEFELKFPPTAPSLHGIFWQFGFPDSSFLTTTMVVEDDNHDDGRSTEEWLFQAQELVPLALDKAKEVKNFPGRWKMIISKLEQIPTRLSDLSSHPCFSKNALCKEQLQAVSSILREAIHLAELCVMDNYEGKLKMQSDLDALSGKLDLHLKDCSLLIKTGVLGEATLPLAISSEVDVSSNIRELLARLQIGHLEAKHRAIEKLHDVMKEDEKSVLAVLTRSSIAALVQLLTATSPRIREKTASIICSLVESGSCENWLVSEGVIPPLIRLIESGSAIGKEKASITFQRLSMSSETARAIVGHGGVRPLIDLCQTGDSVLQAACACTLKNISAVPEVRQVLAEEGIVKVMISLLNCGMLLNSKEYAAECLQNLTSSNENLRRLVISENGIRSLLAYLDVPLPQESSMGALRNLVGSVSEQSLVSMGLLPRLAHVLKSGSIGAQQAAASTICKVCSSGEMKKMIGEAGCVPLLVKMLEAKSNGAREVAAQAVSSLMALSQNQREVKKNDKSVPNLVQLLDPNPQNTAKKYAVACLGSLSSSHKCRKLMISYGAIGYLKKLIEMEIPGAKKLLERLERGKLRSLFSRK 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0018 593 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 474 510 IPR000225 GO:0005515
Alju11g0018 593 SUPERFAMILY ARM repeat 186 572 IPR016024 -
Alju11g0018 593 Pfam Armadillo/beta-catenin-like repeat 465 502 IPR000225 GO:0005515
Alju11g0018 593 Pfam Armadillo/beta-catenin-like repeat 301 340 IPR000225 GO:0005515
Alju11g0018 593 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 46 591 - -
Alju11g0018 593 Gene3D - 186 583 IPR011989 -
Alju11g0018 593 SMART arm_5 383 422 IPR000225 GO:0005515
Alju11g0018 593 SMART arm_5 423 462 IPR000225 GO:0005515
Alju11g0018 593 SMART arm_5 341 382 IPR000225 GO:0005515
Alju11g0018 593 SMART arm_5 218 258 IPR000225 GO:0005515
Alju11g0018 593 SMART arm_5 300 340 IPR000225 GO:0005515
Alju11g0018 593 SMART arm_5 504 546 IPR000225 GO:0005515
Alju11g0018 593 SMART arm_5 463 503 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0018 Alju-ChrAlju11 246146 248337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0018 343 569 U-box Gene Family AT2G23140 29.060 4.14e-09 57.4