Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0012 ATGAGAGCAAGGTCCTCACCCTCGCCGACGACAAGAACCACATCAACAAGCATAACTTCCACATTCCTTTCATCTGTAGGTGTTGCAATCTCGGGGAAGCTCTCCAACAAATTTGCGAAGCTCGAACTTCTTCCTCCTCACTTTCGGCTTCGTTGCTCCATTTTATCTCTCGGCCTCGCCCCTAACGTCATCAACTCCTACCCGAGGTTCTCCTACACCAAGCATGCTCTGGCCTCTGCCTTCGGCGCCGCCGACGCCGACGATAACAATATCATGTGCTCTATCTGTTTGTGTGAGTACAAGGATTCCGAGATGCTGAGGATGATGCCGGAGTGCCGCCATTTCTTCCACCTCATTTGCCTCGATGCATGGCTCAAGCTCAATGGCTCATGCCCAGTCTATCGAAACTCCCTGCTTCCCACATCGATCACGACGCCATTGCAGGAGGTGGTGCCACTCTCTCACTACGCCGCTGATCAGAGGCCCAGCAGTTGA 495 0.5333 MRARSSPSPTTRTTSTSITSTFLSSVGVAISGKLSNKFAKLELLPPHFRLRCSILSLGLAPNVINSYPRFSYTKHALASAFGAADADDNNIMCSICLCEYKDSEMLRMMPECRHFFHLICLDAWLKLNGSCPVYRNSLLPTSITTPLQEVVPLSHYAADQRPSS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0012 164 SMART ring_2 93 134 IPR001841 -
Alju11g0012 164 Pfam Ring finger domain 92 133 IPR001841 -
Alju11g0012 164 SUPERFAMILY RING/U-box 74 138 - -
Alju11g0012 164 PANTHER RING-H2 FINGER PROTEIN ATL67 56 161 IPR044289 GO:0016567|GO:0016740
Alju11g0012 164 ProSiteProfiles Zinc finger RING-type profile. 93 135 IPR001841 -
Alju11g0012 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 140 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0012 Alju-ChrAlju11 146070 146965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0012 58 161 C3H Transcription Factor Family AT2G35910 46.154 2.29e-25 95.1