Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2326 ATGGTTACGTCGACGAGCTTCTTCGGCAGTAGAATCCCCGCAAAATTGGCTTCAAAAGGGAGTTTGCATTTCCGTTGTAATGCCTCTAATGGGCCCTCTTCTTCACTTCGGTCCCTCAGTCTATTTAGTCGTAATAATGTCTACACCTTGTGCAGCTCATCATCACCTTCATTTGGCTTCCAACAAGTCATTCGAATCAGCCCCTACTGCAGCATCAATGAAACTAAGCTTTCCAATAGCAGCAAAAGCAGGAGACGACGTCGATTTAAAGCAAGAACAAAGCTAATTAATCCTAACGAATCTAAGAAGGATGGGTCTTCCCAATATCCATCCCAGTCATCCTTGCCAGTGTTCCCGGCAGAGGACTTGAACACCCAGATAGAAGAACAGGAGGAGGTCCCAGGCATTGAGAGGAGGAGAGAAACTAGCATTGAGGCACCGCTCAGGGTGAGTAGCATCTATCAGAATGGAGACCCACTCGGGCGGAAGGATCTAGGGAAGAGCGTTGTGCGATGGATTCGTCATAGTATGAGGGCCATGGCTTCCGATTTTGCTTCTGCAGAGGCACAGGGGGAGTTCTCGGAGCTGAGGCAGCGCATGGGACCAGGTCTCACCTTTGTAATTCAGGCTCAACCTTATCTGAATGTCGTTCCCATGCCTCTGGGCCTCGAAGTTATCTGCTTGAAGGCTTGCACCCATTATCCTACTCTGTTTGATCACTTTCAAAGGGAGCTGCGGGACGTTCTCCAAGACCTCCAACATAAATCATTGGTCCAGAACTGGTGTGAAACTGAATCATGGAAACTACTGAAAGAGCTCGCCAAATCAGCTCAGCATAGGGCAATTGCAAGAAAGGTAGCGCAGCCAAAGTCTGTCTCTGTCCAAGGCGTTTTAGGAATGGACTTGGAGAAGGCCAAGGCAATACAGCACAGAATTGAGGGATTCACCAAGCACATGTCAGAATTACTCCGCATAGAAAGAGATGCCGAGTTGGAGTTTACACAAGAAGAGTTGGATGCTGTTCCTAGACCAGATGATACTTCTGACTCTTTGAAGCCGATTGAGTTCTTGGTTAGCCATGGTCAGGCTCAACAAGAACTCTGTGACACTATTTGTAATTTAAATGCCATCAGTACATCTACAGGATTGGGAGGAATGCATTTGGTGTTATTCAAGGTTGAAAGGAACCACCGGTTACCACCCACTACCCTTTCACCTGGAGACATGGTTTGTGTGAGAACATGTGATAACAGGGGTGCAGTCACAACCTCTTGTCTGCAAGGCTTTGTTAACAGTCTTGGGGATGACGGCTGTAGTATCAGTGTTGCTTTAGAGTCACGCCATGGTGATCCTACATTCTCTAAACTCTTTGGGAAGAGTGTACGTATTGACCGAATCCAAGGACTGGCTGATACTCTTACCTATGAGCGCAACTGTGAAGCCCTAATGCTGCTTCAGAAGAATGGCTTACGAAAGAAGAATCCTTCTATTGCTGTTGTGGCGACTTTGTTTGGAGACGGGGAAGATTTTGCTTGGTTTGAGAAAAATCATATTGCTGACTGGGATGAAGAAAACATAGACGGACTGTTAGGAAGTGAAAGCTTTGATAATTCCCAGCAAAAAGCTATAGCACTAGGTTTGAATAAAAAAAGGCCTGTATTGGTTATCCAAGGGCCTCCTGGTACAGGGAAGACAGGTTTGCTCAAGCAACTTATAGCATATGCTGTTCAGCGAGGTGAAAGGGTTCTTGTAACAGCACCTACTAACGCAGCTGTTGATAACATGGTGGAAAAGCTTTCAAATATTGGATTAAATATTGTGCGGGTTGGCAATCCTGCTCGCATATCAAAAACTGTGGGTTCAAAGTCTTTAGGGGACATTGTGAATGCTAAGCTTGCAAGTTTTCGAGCTGAGTATGAAAGGAAGAAGTCAGATCTAAGGAGAGATCTTAGACATTGCTTAAAAGATGATTCATTAGGAGCTGGCATACGCCAACTTTTGAAACAGTTGGGAAGGTCAGTGAAGAGAAAGGAAAAGGAGACTATGAATGAGGTGCTATCTAGTGCTCAGGTTGTGTTTGCCACAAATACTGGAGCAGCTGATCCATTGATTCGAAGGCTAGATGCTTTTGACTTGGTTGTTATAGATGAAGCTGGACAGGCAATTGAACCTTCTTGTTGGATTCCTATATTGCAAGGAAAGCGCTGCATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTATCTAGAAAGGCTTTGGAAGGAGGTCTTGGAATATCATTACTAGAGAGGGCTACAACTTTGCATGAAGGAGTCCTCACCACAAGGTTAACAATACAATACCGTATGAACGATGCAATTGCTAGTTGGGCATCAAAGGAGATGTATGGTGGATTATTGAAGTCCTCTGAGAATGTCTTTTCTCATCTTCTTGTAGACTCTTCTTTTGTCAAGCCTACATGGATAACACAATGTCCTCTGTTGTTGCTCGATACAAGAATGCCATATGGAAGTCTGTCAATTGGTTGTGAAGAGAATCTAGACCCAGCTGGAACAGGTTCATTTTATAATGAAGGAGAAGCTGATATTGTTGTGCAGCATGTCTTTTCCTTAATTTTTGCTGGTGTCAACCCAACAACTATTATGGTGCAATCTCCTTATGTTGCTCAAGTACAACTTTTGAGGGACATGCTGAATGAGCTGCCAGAGGCTGTTGGTACTGAGGTTGCAACAATTGATAGCTTTCAAGGACGGGAAGCTGATGCAGTAATTATATCCATGGTACGTTCAAACGCTTTAGGTGCTGTTGGATTCCTAGGTGATAGCAGAAGAATCAATGTTGCCATTACTAGGGCACGCAAGCATGTAGCAGTGGTATGTGACAGCTCCACAATTTGCCATAATACCTTCTTAGCAAGACTACTACGTCACATCCGGCATTTCGGTAGGGTGAAACATGCAGAACCCGGTCGTTCTGGAGGTTCTGGGCTGGGCATGAATCCAATGTTACCCTCCATTAATTAG 3030 0.4479 MVTSTSFFGSRIPAKLASKGSLHFRCNASNGPSSSLRSLSLFSRNNVYTLCSSSSPSFGFQQVIRISPYCSINETKLSNSSKSRRRRRFKARTKLINPNESKKDGSSQYPSQSSLPVFPAEDLNTQIEEQEEVPGIERRRETSIEAPLRVSSIYQNGDPLGRKDLGKSVVRWIRHSMRAMASDFASAEAQGEFSELRQRMGPGLTFVIQAQPYLNVVPMPLGLEVICLKACTHYPTLFDHFQRELRDVLQDLQHKSLVQNWCETESWKLLKELAKSAQHRAIARKVAQPKSVSVQGVLGMDLEKAKAIQHRIEGFTKHMSELLRIERDAELEFTQEELDAVPRPDDTSDSLKPIEFLVSHGQAQQELCDTICNLNAISTSTGLGGMHLVLFKVERNHRLPPTTLSPGDMVCVRTCDNRGAVTTSCLQGFVNSLGDDGCSISVALESRHGDPTFSKLFGKSVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSIAVVATLFGDGEDFAWFEKNHIADWDEENIDGLLGSESFDNSQQKAIALGLNKKRPVLVIQGPPGTGKTGLLKQLIAYAVQRGERVLVTAPTNAAVDNMVEKLSNIGLNIVRVGNPARISKTVGSKSLGDIVNAKLASFRAEYERKKSDLRRDLRHCLKDDSLGAGIRQLLKQLGRSVKRKEKETMNEVLSSAQVVFATNTGAADPLIRRLDAFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISLLERATTLHEGVLTTRLTIQYRMNDAIASWASKEMYGGLLKSSENVFSHLLVDSSFVKPTWITQCPLLLLDTRMPYGSLSIGCEENLDPAGTGSFYNEGEADIVVQHVFSLIFAGVNPTTIMVQSPYVAQVQLLRDMLNELPEAVGTEVATIDSFQGREADAVIISMVRSNALGAVGFLGDSRRINVAITRARKHVAVVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGRSGGSGLGMNPMLPSIN 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2326 1009 Coils Coil 636 656 - -
Alju10g2326 1009 CDD DEXXQc_SMUBP2 534 784 - -
Alju10g2326 1009 SMART AAA_5 550 765 IPR003593 GO:0016887
Alju10g2326 1009 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 181 992 - -
Alju10g2326 1009 Pfam AAA domain 761 964 IPR041679 -
Alju10g2326 1009 SMART ultradead3 531 784 IPR014001 -
Alju10g2326 1009 CDD SF1_C_Upf1 785 981 IPR047187 -
Alju10g2326 1009 MobiDBLite consensus disorder prediction 100 115 - -
Alju10g2326 1009 Gene3D - 338 469 - -
Alju10g2326 1009 MobiDBLite consensus disorder prediction 77 115 - -
Alju10g2326 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 534 972 IPR027417 -
Alju10g2326 1009 Gene3D - 783 991 IPR027417 -
Alju10g2326 1009 Pfam AAA domain 535 751 IPR041677 GO:0004386
Alju10g2326 1009 Gene3D - 319 767 IPR027417 -
Alju10g2326 1009 FunFam DNA-binding protein SMUBP-2 isoform X2 338 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2326 Alju-ChrAlju10 45101371 45118612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2326 526 724 Core DNA Replication Machinery Family AT1G08840 27.363 9.65e-09 57.8