Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2304 ATGGAAGATCGCAATCAATGGCATCTTTACGACCCACTTCTTCTCACAGACGCTTCTTTGCAGCATAAAAACTCTTCTATTCACTCCATTTACAATTCACAAACATCACTGAGCTCTCTAAGTCCAACAATGGCGGAGACTGAATGGCAGGACAGCCAAAATGACGAATTTTCATGGAAAAGACGAGAGTTTGACCAAAAAGATGTGCAATTCGAAGACCCAATAGCAAAAAAGGTGGTTGATGGCCGATCACTGTTAGGGTATTCTTTAACGTCGCCTGATTTGGTCATCTGCGCTGGCTTACCAGATATGGCCATGGAATCTCCTGAGATGTTGGAAAACAAATCTCGTCAAAAGGTGGAGTCGCCTATGGAGCTTTCTTTAGAGAATGGAATTAATGGGTCTGATGTTGTAAAGCCTCAGAAGATTCCAACCGTCAAATTCTCTATGTTTTGTGAAACCTTCAAAGAGCTGCCTCCCGATGCCTCTTTTGAGCTTTTCCCACCCCCAGAAGTGACCGATAAGTCGCCTCAAGACTACCCTTCTAGTGAAAATGAATTGCAAGAAGATTTGGAAGTATCACAAGAGGCAGAATTGGATTCTCCAGATGGTAGCGGAGATAACGAGGAAGAAGAGGATTTTCAGAAGCTGAGAAGGAAATTTAAGTGTCAGAAAAAGGAGCTGGCTGGAACTAGGAGGATGTTGGAGGGACTCAAAAGGGAGAATCAACGGAAGAATACAGAATGCCAAGAAGCATTGAAGTCTTTGCAAGCTCTTCAGAATGAGCTCATGCGCAAGTCCATGCATGTAGGATCATTGGCATTTGCCATTGAGGGGCAAGTAAAAGAAAAAAGCATGTGGTTTTCCTCTCTGGGAGTCCTGATGAGGAAAGTAAAGATTATGAAAATGGAACACATCAAATTATCGGAGGAAGTAGAGACATATAAGAAGTATCTAGAAGATATGAGTGAAATGGGGATTACTATCAAGTCCAAGATACATGAGCAGCTGGAGTTCCACGAAGATCTCAAGACCAAATATCTAGATGGCGCTAGGAAACAAAAAGAACTTTACAATAAGGTTTTGGAGCTGAAAGGGAACATCAGGGTCTTTTGCCGGTGTAGGCCTCTTAATGCAGAAGAGATGACATCGGGAGCAAGAATGGCAATAGATTTTGAATCAGCGAAAGATGGTGAGCTTACTGTACTGTCAAATGGGGCTTCTAGAAGGACTTTCAAGTTTGATGCTGTTTTTGGGCCTCAAGCAGATCAAGCCGACATATTTGAAGACACAGCACCATTTGCAACCTCAGTTCTAGATGGGTATAATGTATGCATATTTGCTTATGGGCAGACTGGAACAGGAAAAACATTTACAATGGAAGGTACAGAAAAGGCACGTGGAGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAAAGAGAGACAGAGGCTCTACCGTTATGATGTCTCTGTAAGCGTGTTAGAAGTCTACAATGAGCAAATAAGAGACTTGCTTGTCTCAGGAAATCAGCTTGGAATAGCTGCAAGAAGGCTTGAAATAAGGCAAGCAGGCGAAGGAATGCACCATGTTCCGGGACTTGTGGAGGCACACGTAAATAACATGACTGAAGTCTGGGAAGTCCTACAAACTGGCAGCAACGCAAGGGCTGTTAGCTCAACCAATGCCAATGAGCACAGCAGTCGATCCCACTGCATTCACTGTGTGATGGTGAAGGGGGAGAATTTGTTGAATGGGGAATGCACAAGAAGCAAGTTGTGGCTAGTAGACCTGGCAGGCAGCGAGCGAGTGGCTAAAACAGAAGTGCAAGGGGATCGACTCAAGGAAACTCAGAATATTAATAGGTCTCTCTCTGCACTAGGAGATGTTATATCAGCTCTTGCAACAAAATGCTCACATGTTCCGTTCAGAAATTCCAAACTCACACACTTGCTGCAAGACTCTTTAGGAGGAGATTCAAAGGCGCTCATGTTTGTACAGATTAGTCCTAATGAAAATGATTTAAGTGAGACGATTTGCTCTCTGAACTTTGCTAGTAGAGTGAGAGGAATAGAATTAGGGCCTGCAAAAAGGCAATTGGACCCTACTGAACTTCTCAAATACAAACAATTGGCTGAGAAAACCAAGCAAGAGATGAAGATCAAGGACTTGCAAATCAAGAAAATGGAGGAAACAATTCAAGGATTAGATTCCAAGATAAAGGAGAGAGATGTTAAAACTAAAACTCTGCAAGATAAGGTCAAGGAATTGGAATCCCAACTTTTGATTGAGAGAAAGCTGGCGCGTCAACATGTAGACTCAAAGATAGCTGAGCAGCATCTGCTTAAACATCAAGAGCAAAACAACACACCAATGAGACCAGCACTTGCAAACAAACCACTAGGGATTCACAAGAACTTGAATGATTTCATGAGTTCGACTAGACCACTTATGGAGAACAATATCTTAAAGCAGCCCTCACTTCCCTTTTCAACGTTGGAAAACTCCATCAAGTGCATTGATCACGCCGAGAAAGAGAACAATCCTGACATAGTTGACAAACTTGTATTGCCTAAAAGGACTGGAAGAGCTTCTATCTGCACAACTACTCCACGTATTCCTTCAGTCATAACTTTAAGGCGAAACTCTCTGATACCTCTCCCAACTGTGGCTAACTTACCTCAACTCACACCAACAGTAATGCCAGTGCTAGAAAGTAGAGCTGAAGAGGAAGAAAGCAATGATGAAGAGGGAAACTGTTTGGCTACACAGACACATCTTGAGAGTCCTAAGCAAAGAATGAGGAGTGAAAGTAAGAAGAGAGGAAGCAACATGCTAAGGCGAAGCTTATATAAAAAGATTCAGAACAAGTCGCCAATTCAACAACATATGAGAAGGGTTGGTGTAAATGTAGGTATGGAGAAAGTGAGAGTTTCCATTGGGAGTCAAGGGAGGATGATGGCAAAGAGGGTGTTGAGGAAAAATGGTAGAAGAAATGGAACAGAAGAAACTCAGCAAAAGAATAGTAAAAAAGAAAAGGAAAGAGGGTGGAATGCAGGTACAGCAGGCAAATCCACTTTTTGA 3090 0.4239 MEDRNQWHLYDPLLLTDASLQHKNSSIHSIYNSQTSLSSLSPTMAETEWQDSQNDEFSWKRREFDQKDVQFEDPIAKKVVDGRSLLGYSLTSPDLVICAGLPDMAMESPEMLENKSRQKVESPMELSLENGINGSDVVKPQKIPTVKFSMFCETFKELPPDASFELFPPPEVTDKSPQDYPSSENELQEDLEVSQEAELDSPDGSGDNEEEEDFQKLRRKFKCQKKELAGTRRMLEGLKRENQRKNTECQEALKSLQALQNELMRKSMHVGSLAFAIEGQVKEKSMWFSSLGVLMRKVKIMKMEHIKLSEEVETYKKYLEDMSEMGITIKSKIHEQLEFHEDLKTKYLDGARKQKELYNKVLELKGNIRVFCRCRPLNAEEMTSGARMAIDFESAKDGELTVLSNGASRRTFKFDAVFGPQADQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEKARGVNFRTLEKMFDIIKERQRLYRYDVSVSVLEVYNEQIRDLLVSGNQLGIAARRLEIRQAGEGMHHVPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKCSHVPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPAKRQLDPTELLKYKQLAEKTKQEMKIKDLQIKKMEETIQGLDSKIKERDVKTKTLQDKVKELESQLLIERKLARQHVDSKIAEQHLLKHQEQNNTPMRPALANKPLGIHKNLNDFMSSTRPLMENNILKQPSLPFSTLENSIKCIDHAEKENNPDIVDKLVLPKRTGRASICTTTPRIPSVITLRRNSLIPLPTVANLPQLTPTVMPVLESRAEEEESNDEEGNCLATQTHLESPKQRMRSESKKRGSNMLRRSLYKKIQNKSPIQQHMRRVGVNVGMEKVRVSIGSQGRMMAKRVLRKNGRRNGTEETQQKNSKKEKERGWNAGTAGKSTF 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2304 1029 SMART kinesin_4 365 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju10g2304 1029 CDD KISc_C_terminal 365 695 - -
Alju10g2304 1029 MobiDBLite consensus disorder prediction 997 1020 - -
Alju10g2304 1029 PRINTS Kinesin heavy chain signature 563 580 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju10g2304 1029 PRINTS Kinesin heavy chain signature 643 664 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju10g2304 1029 PRINTS Kinesin heavy chain signature 441 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju10g2304 1029 PRINTS Kinesin heavy chain signature 594 612 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju10g2304 1029 Coils Coil 1029 1029 - -
Alju10g2304 1029 MobiDBLite consensus disorder prediction 993 1029 - -
Alju10g2304 1029 MobiDBLite consensus disorder prediction 908 948 - -
Alju10g2304 1029 ProSitePatterns Kinesin motor domain signature. 593 604 IPR019821 GO:0003777|GO:0005524|GO:0007018
Alju10g2304 1029 Gene3D Kinesin motor domain 362 737 IPR036961 -
Alju10g2304 1029 MobiDBLite consensus disorder prediction 162 214 - -
Alju10g2304 1029 FunFam kinesin-like protein KIN-14R 312 695 - -
Alju10g2304 1029 MobiDBLite consensus disorder prediction 932 946 - -
Alju10g2304 1029 Pfam Kinesin motor domain 373 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju10g2304 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 731 IPR027417 -
Alju10g2304 1029 Coils Coil 221 266 - -
Alju10g2304 1029 ProSiteProfiles Kinesin motor domain profile. 367 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju10g2304 1029 MobiDBLite consensus disorder prediction 185 210 - -
Alju10g2304 1029 PANTHER KINESIN-LIKE PROTEIN KLP-3 127 907 IPR027640 GO:0003777|GO:0007018
Alju10g2304 1029 Coils Coil 714 734 - -
Alju10g2304 1029 Coils Coil 742 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2304 Alju-ChrAlju10 44741924 44746685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2304 354 720 Calmodulin-binding Proteins AT5G65930 43.127 2.10e-80 284