Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2302 ATGACATTACGCGGTTGCGTTGATCAAAACTTATGCGCCAAGTCTTGGTCGTCGAACGTGAAAGGTAGCGACACAGAGCCAAGAAACATAGAAGAGTCAAACTGCTCACTTGTACTTCATTCGGTCATGACTTGTTTTCCTGTATTATTTGGTAGAAGGTCACATTCTTCAGCAAGGCTAGATCCGGCGATTGAAGAAGAGTTTTCTGTTCTTCACAATGTCAGACTTTATGCATACAAAGAACTACGAACTGCCACTGAAGATTTTAGTCCTGTTAATAAAATTGGAGAGGGCGGTTTTGGTTCTGTTTACAAGGGACGATTAAAAGGTGGAAAAGTTGCTGCTATTAAAGTCCTTTCAGCTGAATCAAGACAGGGGGTGAGGGAATTCTTGACAGAGATTAAGGTGATCTCAGAAATAGAGCATGAAAATTTAGTTAAGCTTTATGGCTGTTGTGTGGAAGGAAATCACAGAATATTGGTCTACAATTACCTTGAGAACAACAGCCTCGCACAAACCCTTATTGGTAGACGACATAGCAGTATCCAATTCAATTGGCGAACAAGGTCTAGAATATGCATTGGGGTTGCACGTGGGATTGCCTTTCTCCATGAGGAAGTAAGACCACATATTGTTCATAGGGACATAAAAGCAAGTAACATTCTTCTTGACAAAGACCTCACACCCAAGATTTCAGATTTTGGGCTTGCAAAACTGATTCCAGCAAACATGACCCATGTTAGCACACGCGTCGCAGGAACTATAGGTTACCTGGCACCAGAGTATGCAATAGGAGGCAAGCTGACACGAAAAGCTGATATATACAGCTTTGGAGTCCTCCTTGTGGAGATTGTAAGTGGTAGATATAACACAAATACACAATTACCAGTTGAAGAACAATACATTCTAGAAAGGACATGGAATCTTTACGAGCGAAGGGAATTGGTAGGACTGGTGGATGAATCGCTGAACGGGGAGTTTGATGCTGAGGAAGCTTGCAGATTTCTCAAGATTGGCCTTCTTTGCACCCAGGATGATCCCAAGGTGCGGCCATCCATGTCCTCCGTCGTTAACATGCTCACCGGCAGAATGCGTGTGGACGAGAAGAACATAACAAAACCAGCCTTGATCTCTGATTTTATGGACCTCAAAGTCAGGAAAAAACCAGTCAGTAATATTGACATGCACACTCAGGCTTCTTCATCCTCCTACCATTCATCCTCCGCCTCCTACAACCAGGATACTACTTTTTCATCAACCGTTTCAACCGCCGCAACTACAACCTTCACGGCACGATATGATCATAGCATAGTGTTTGTTGGTGCAAGCTACGAGTTTTGTTCATTAGTATGTATATTGGAATCTGGCTTTAAGCGGCCTAACTGCTCCGTTTACTTGCAAAAGGACCTTATGTCTAGCATAGAGGATAACAAAGAACAGGGAGTGAATGTGAATACATCTGACGAGTCAGCTGATATGCCATTGTCCCAGGAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGAATGATGCCCAAAAAGCCTCCACTCATATCCAAGGACCATGACCGTGCATACTTTGATTCTGCGGATTGGGCACTTGGAAAGCAAGGTGGTGGAAAGCCAAAAGGACCACTTGAGGCTCTGCGGCCTAAATTGCAGCCCACGCAGCAGCAAACACGTTACCGGAAATCTCCTTATGCTCCCTCAGATGAAGGGGGGAATATTTCACCGGAGGATGTACCTTCCAATGAGTAA 1758 0.4391 MTLRGCVDQNLCAKSWSSNVKGSDTEPRNIEESNCSLVLHSVMTCFPVLFGRRSHSSARLDPAIEEEFSVLHNVRLYAYKELRTATEDFSPVNKIGEGGFGSVYKGRLKGGKVAAIKVLSAESRQGVREFLTEIKVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGRRHSSIQFNWRTRSRICIGVARGIAFLHEEVRPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIGGKLTRKADIYSFGVLLVEIVSGRYNTNTQLPVEEQYILERTWNLYERRELVGLVDESLNGEFDAEEACRFLKIGLLCTQDDPKVRPSMSSVVNMLTGRMRVDEKNITKPALISDFMDLKVRKKPVSNIDMHTQASSSSYHSSSASYNQDTTFSSTVSTAATTTFTARYDHSIVFVGASYEFCSLVCILESGFKRPNCSVYLQKDLMSSIEDNKEQGVNVNTSDESADMPLSQEEEEVIKKKYGGMMPKKPPLISKDHDRAYFDSADWALGKQGGGKPKGPLEALRPKLQPTQQQTRYRKSPYAPSDEGGNISPEDVPSNE 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2302 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Alju10g2302 585 SMART serkin_6 89 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2302 585 Gene3D Phosphorylase Kinase; domain 1 61 164 - -
Alju10g2302 585 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
Alju10g2302 585 MobiDBLite consensus disorder prediction 532 585 - -
Alju10g2302 585 Gene3D Transferase(Phosphotransferase) domain 1 165 376 - -
Alju10g2302 585 Pfam cAMP-regulated phosphoprotein/endosulfine conserved region 496 563 IPR006760 -
Alju10g2302 585 ProSiteProfiles Protein kinase domain profile. 89 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2302 585 CDD STKc_IRAK 95 362 - -
Alju10g2302 585 FunFam cold-responsive protein kinase 1 165 376 - -
Alju10g2302 585 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 8 403 - -
Alju10g2302 585 FunFam cold-responsive protein kinase 1 61 164 - -
Alju10g2302 585 SUPERFAMILY Protein kinase-like (PK-like) 69 361 IPR011009 -
Alju10g2302 585 Pfam Protein kinase domain 92 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2302 Alju-ChrAlju10 44701403 44710257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2302 77 430 Receptor kinase-like Gene Family AT1G53430 49.435 2.38e-107 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g2302 Pkinase 4.5e-47 CL0016