Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2300 ATGGTGGAGGCCAAGTTGCCACCAGGTTTCAGGTTCCATCCCAGAGATGAAGAACTTGTGTGCGATTACTTGATGAAGAAAGTCAGTCACTCTGATAATTCCGATTCCAATCTCCTGATTGACGTTGACCTTAACAAGTGTGAGCCTTGGGATATTCCAGAAAGGGCATGCGTGGGAGGGAAGGAGTGGTATTTCTACACGCAGAGGGACAGGAAGTATGCGACGGGGATGAGAACAAACAGGGCGACGGCGTCCGGGTACTGGAAGGCCACAGGGAAGGACCGGTGTGTCCTTAGGAAGGGCAAAGTGGTTGGCATGAGAAAGACTTTGGTTTTCTATGAGGGAAGAGCCCCCAAAGGCACCAAGACCGACTGGGTCATGCACGAGTTTCGCCTTCATCCCTTTCCTCATTATTCTTGTAATTTCCCCAACCAAGACTGGGTTCTCTGTAGGGTTTTCTACAAGAACAGAGATGAACAAGACAACAAAAACAATTATAATGGAAAATCTGGCATGCCAAGCTCCTATGTGCCCGGCTCTTCGTCTCTCCCTGAATTAACGGATTCTTACATAAGTTTTGATCAGGCTTCTGGTGATCATGCAGCTCATGAATATGAGCAAGTGCCCTGCTTCTCCAGCCCTCCTCCTCCTCCTCCTCCTCCTACAAACCCTAACCCTAGCAGCCTCTATCACACCAACTTATTATTGGCTCCCTCTCCAAATGCACCTCCATTTTCTCATGACTCCCACGTTCTTAAAGCCTTGCTGACACAACTCTCCAATATGGAAACTCATCAGCAAGGATCGCCCACCAGCTTTGAAGTTCATTATGCTTCTCAGACTTCCTTATTGTCTCAACCGCCTATTATTCCCACTTATTTATGGAACAATCACTAG 897 0.4771 MVEAKLPPGFRFHPRDEELVCDYLMKKVSHSDNSDSNLLIDVDLNKCEPWDIPERACVGGKEWYFYTQRDRKYATGMRTNRATASGYWKATGKDRCVLRKGKVVGMRKTLVFYEGRAPKGTKTDWVMHEFRLHPFPHYSCNFPNQDWVLCRVFYKNRDEQDNKNNYNGKSGMPSSYVPGSSSLPELTDSYISFDQASGDHAAHEYEQVPCFSSPPPPPPPPTNPNPSSLYHTNLLLAPSPNAPPFSHDSHVLKALLTQLSNMETHQQGSPTSFEVHYASQTSLLSQPPIIPTYLWNNH 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2300 298 MobiDBLite consensus disorder prediction 160 180 - -
Alju10g2300 298 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Alju10g2300 298 MobiDBLite consensus disorder prediction 210 226 - -
Alju10g2300 298 MobiDBLite consensus disorder prediction 207 231 - -
Alju10g2300 298 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Alju10g2300 298 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 233 - -
Alju10g2300 298 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Alju10g2300 298 Pfam No apical meristem (NAM) protein 7 132 IPR003441 GO:0003677|GO:0006355
Alju10g2300 298 MobiDBLite consensus disorder prediction 165 180 - -
Alju10g2300 298 FunFam NAC domain-containing protein 100-like 15 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2300 Alju-ChrAlju10 44684821 44686957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2300 1 296 NAC Transcription Factor Family AT1G56010 53.271 4.28e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju10g2300 NAM 3.6e-38 No_clan