Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2288 ATGGGACCAAACTATGTCCCTGGGGAGAAGAAGGACTTGTATGTTAAGAACGTGCAAAGAACTGAAATCTGGATGGGAAAGAAGCAAGAAACTGTTGTCGATGTGCCTTGTGGTAACACAGTTGCTATGGTTGGTCTGGATCAATTTATTACCAAAAATGCTACATTAACAAATGAAAAGGAAGTGGATGCCCACCCTATCCGAGCAATGAAGTTTTCTGTTTCACCTGTGGTACGTGTTGCTGTTCAGTGTAAAGTTGCATCCGATCTTCCAAAGCTTGTTGAAGGTCTCAAACGATTGGCCAAATCGGATCCTATGGTTATGTGTACTATGGCAGAGTCTGGAGAGCACATTGTTGCTGGTGCAGGAGAGCTTCACCTGGAGATCTGTTTGAAGGACTTGCAAGTAGATTTTATGGGCGGAGCAGAGCTTATAAAGTCTGACCCTGTTGTGTCCTTCCGTGAAACTGTTCTAGAGAGATCTTGCCGTACTGTGATGAGTAAATCACCCAACAAGCACAACCGTCTGTACATGGAGGCAAGGCCCATGGAGGAAGGGCTTGCAGAGGCAATTGATGAAGGCAAGATTGGACCCAAAGATGACCCCAAGGTTCGTTCTAAAATATTATCTGAAGAGTTTGGTTGGGACAAGGATCTTGCCAAAAAAATCTGGTGTTTTGGACCTGAGACCATGGGACCAAACATGGTAGTAGATATGTGTAAGGGAGTTCAGCACCTGAATGAAATAAAGGATTCTGTTGTTGCTGGATTCCAGTGGGCATCAAGAGAAGGTGCAATGGCTGAGGAGAACATGAGGGGCATTTGTTTTGAAGTCTGTGATGTTGTTCTTCACGCTGATGCTATCCACAGAGGAGGCGGTCAGATCATTCCAACTGCAAGGAGAGTCTTTTATGCTGCACAATTGACTGGTAAGCCCAGGCTTCTTGAGCCTGTTTACCTGGTGGAAATCCAAGCTCCTGAGCAGGCTCTCGGCGGAATCTACAGTGTTCTTAACCAGAAACGCGGACATGTCTTTGAGGAAATGCAGGGGCCTGGTACTCCTCTTTATAACATTAAGGCATACCTCCCTGTCATTGAGTCTTTTGGGTTCTCAAGCACATTGAGGGCTGCAACATCAGGGCAGGCATTCCCACAGTTGATATTTGATCACTGGGATATGTTGTCATCGGATCCACTTGAGCCTGGAACACAAGCTGCACAGATTATTACAGACATTCGCAAGAGGAAGGGCTTGAAGGAGCAGATGACTCCACTTTCAGAATAG 1284 0.4595 MGPNYVPGEKKDLYVKNVQRTEIWMGKKQETVVDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVMCTMAESGEHIVAGAGELHLEICLKDLQVDFMGGAELIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGKIGPKDDPKVRSKILSEEFGWDKDLAKKIWCFGPETMGPNMVVDMCKGVQHLNEIKDSVVAGFQWASREGAMAEENMRGICFEVCDVVLHADAIHRGGGQIIPTARRVFYAAQLTGKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQGPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQLIFDHWDMLSSDPLEPGTQAAQIITDIRKRKGLKEQMTPLSE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2288 427 Pfam Elongation factor G C-terminus 313 399 IPR000640 -
Alju10g2288 427 Gene3D Translation factors 1 73 - -
Alju10g2288 427 FunFam Translation elongation factor 2 158 311 - -
Alju10g2288 427 SUPERFAMILY Ribosomal protein S5 domain 2-like 151 315 IPR020568 -
Alju10g2288 427 SUPERFAMILY Translation proteins 1 65 IPR009000 -
Alju10g2288 427 SMART EFG_IV_2 194 311 IPR005517 GO:0005525
Alju10g2288 427 Pfam Elongation Factor G, domain III 76 138 IPR041095 -
Alju10g2288 427 SMART EFG_C_a 313 402 IPR000640 -
Alju10g2288 427 CDD EF2_snRNP_III 76 148 - -
Alju10g2288 427 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 424 - -
Alju10g2288 427 Pfam Elongation factor G, domain IV 200 309 IPR005517 GO:0005525
Alju10g2288 427 Gene3D - 159 310 IPR014721 -
Alju10g2288 427 CDD EF2_II 1 59 - -
Alju10g2288 427 FunFam Translation elongation factor 2 312 427 - -
Alju10g2288 427 Gene3D - 312 427 - -
Alju10g2288 427 SUPERFAMILY EF-G C-terminal domain-like 73 149 IPR035647 -
Alju10g2288 427 Gene3D Elongation Factor G (Translational Gtpase), domain 3 74 152 - -
Alju10g2288 427 SUPERFAMILY EF-G C-terminal domain-like 316 423 IPR035647 -
Alju10g2288 427 CDD aeEF2_snRNP_like_IV 148 320 - -
Alju10g2288 427 CDD eEF2_snRNP_like_C 316 394 - -
Alju10g2288 427 FunFam Translation elongation factor 2 75 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2288 Alju-ChrAlju10 44576424 44577707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2288 1 427 Eukaryotic Initiation Factors Gene Family AT1G56070 89.461 0.0 813