Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2287 ATGACTGCAGCTTTCTCTTCCCTTCTCGCTACGGTGAGCGAAGGGGCAGCCAGCCCAGTTGTGGCTCTTGCTGTGGCTTTTGTAGCGGCGGTGGACTTTGAACTCCTACCTGCAGCGCCGGACCTGGAATTTGGCTTAGCAAGCCATTTTCTTTCTTCCAAACAGGCCCTGAGGGGGCTGGTGAAGTTCACTGCTGAAGAGCTTCGTCGAATTATGGACTTTAAGCACAATATTCGAAAATCTACCCTCACTGACTCTCTTGTGGCGGCTGCTGGTATTATTGCACAAGAAGCAGCAGGTGATGTCCGGATGACTGATACCCGTCAAGATGAAGCAGAGCGTGGTATCACAATCAAGTCTACTGGTATTTCTCTCTACTACAAAATGACTGATGAGGCTCTCAAGGGCTTCAAAGGTGAACGCAACGGCAATGAGTATCTTATAAATCTGATTGACTCCCCTGGGCATGTGGACTTCTCATCTGAGGTCACAGCCGCGCTCCGTATAACTGATGGAGCTCTAGTGGTGGTAGATTGTATTGAAGGTGTTTGTGTTCAAACTGAAACTGTGCTTCGACAGGCACTTGGAGAAAGAATTAGGCCTGTTTTGACTGTGAATAAAATGGACAGGTGCTTCCTTGGGCTCCAGGTGGATGGAGAGGAGGCTTACCAAACCTTTCAAAGGGTTGTTGAGAATGCTAATGTGATCATGGCTACCTATGAAGATCCCCTCCTTGGTGATTGTCAGATTTACCCAGAGAAAGGAACAGTTGCTTTTTCAGCTGGTTTGCATGGTTGGGCTTTCACCTTGACCAACTTTGCTAAAATGTATGCCTCTAAATTTGGAGTTGACGAGTTAAAGATGATGGAAAGGTTGTGGGGTGAGAACTTCTTTGATCCAGCAACCAAGAAATGGACCAGCAAGCACACTGGTTCGCCTACCTGCAAGCGCGGGTTTGTTCAGTTCTGTTATGAGCCTATAAAGCAGATAATTTCCACTTGTATGAATGATCAAAAGGATAAGTTGTGGCCTATGCTGCAAAAGCTTGGAGTCAACATGAAATCTGAAGAAAAGGACCTAATGGGTAAAGCATTGATGAAGCGTGTCATGCAAACGTGGCTCCCAGCAAGCAGTGCACTTTTGGAAATGATGGTATTCCATCTTCCCTCCCCATCAAAAGCCCAAAGATATCGTGTTGAAAACTTGTATGAGGGGCCTCTTGATGATCGATATGCGGCGGCAATCAGGAATTGTGATCCTGATGGACCCCTAATGCTTTGTCTCAAAAATGATTCCTGCATCTGA 1305 0.4651 MTAAFSSLLATVSEGAASPVVALAVAFVAAVDFELLPAAPDLEFGLASHFLSSKQALRGLVKFTAEELRRIMDFKHNIRKSTLTDSLVAAAGIIAQEAAGDVRMTDTRQDEAERGITIKSTGISLYYKMTDEALKGFKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLGLQVDGEEAYQTFQRVVENANVIMATYEDPLLGDCQIYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDELKMMERLWGENFFDPATKKWTSKHTGSPTCKRGFVQFCYEPIKQIISTCMNDQKDKLWPMLQKLGVNMKSEEKDLMGKALMKRVMQTWLPASSALLEMMVFHLPSPSKAQRYRVENLYEGPLDDRYAAAIRNCDPDGPLMLCLKNDSCI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2287 434 NCBIfam small GTP-binding protein domain 80 227 IPR005225 GO:0005525
Alju10g2287 434 Pfam Elongation factor Tu GTP binding domain 80 390 IPR000795 GO:0003924|GO:0005525
Alju10g2287 434 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 80 301 IPR000795 GO:0003924|GO:0005525
Alju10g2287 434 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 79 427 - -
Alju10g2287 434 Gene3D Translation factors 391 430 - -
Alju10g2287 434 PRINTS GTP-binding elongation factor signature 201 210 IPR000795 GO:0003924|GO:0005525
Alju10g2287 434 PRINTS GTP-binding elongation factor signature 113 121 IPR000795 GO:0003924|GO:0005525
Alju10g2287 434 PRINTS GTP-binding elongation factor signature 165 176 IPR000795 GO:0003924|GO:0005525
Alju10g2287 434 PRINTS GTP-binding elongation factor signature 149 159 IPR000795 GO:0003924|GO:0005525
Alju10g2287 434 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 106 121 IPR031157 -
Alju10g2287 434 Gene3D - 79 273 IPR027417 -
Alju10g2287 434 Gene3D Yeast translation eEF2 (G' domain) 274 374 - -
Alju10g2287 434 FunFam Elongation factor 2 270 374 - -
Alju10g2287 434 FunFam Translation elongation factor 2 62 285 - -
Alju10g2287 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 389 IPR027417 -
Alju10g2287 434 CDD EF2 80 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2287 Alju-ChrAlju10 44573317 44576353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2287 60 426 Eukaryotic Initiation Factors Gene Family AT1G56070 87.566 0.0 699