Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2283 ATGGATCATATAATGGAAGATTTGAGAAGCACTACAGAAGAAGAGCAGTTTGAACTTCCAGGGTTTCGATTCCATCCAACAGATGAGGAACTCGTGAGATTCTACCTCAGAAGGAAGCTCGACAAGAAACCCATCAGTATCGAACTCATCAAGCAGATTGATATCTACAAATACGACCCTTGGGATCTTCCCAAAGCTAGTTGGACGGGGGGAGAGAAGGAGTGGTACTTCTATTGCAGAAGGGGGAGGAAGTACAAGAACAGTATAAGGCCGAACAGAGTGACAGGATCAGGGTTTTGGAAGGCAACGGGAATAGACAAGCCTGTGTATTCTGTTGCAGGAGAAGGCATTAGTGATTGCATTATTGGCCTCAAGAAAACACTTGTTTACTATCGTGGTAGTGCTGGTAAAGGCACCAAAACTGAGTGGATGATGCATGAGTTTCGCCTTCCCTCCAACATAAATCACCCTTCTCATAATCCCCAAGAAGCTGAAATTTGGACGCTCTGTAGAATTTTCAAAAGAACTGTGTCGCAAAGAAAATGCACACCAGATTGGGCACAAATGGCTGCAAAGCGTCGTTGCAGTGACAAGATGAGCAGATCAATGAGCAATAATAATAGTGCTGTGGATTCTTGTAATAGTACTATTACTTATGATCAAGAATCATATATCAACTTCGGATCAGGCAGCCCAGAGCAGAAGCCTCAGCTTGTTCATAACTACAGTACCAGCAACAATAATCATCATTATAATTGTGATGATAATCAAAGGAATCATAATTTCAGCCGTACTTCAATGGCTGCACAACATCATCATCATCAGCAGCAGCATCATCAATTAACCACGTCGACGTCTTCGCCATCGTCAGCTCTGAGCTTCTGGGGTAATAACCAGCAGGCTTCCAATAATGACCTGTTTGCGTTTGAGAACCCATGGGATGAGCTTGAATCAGTGGTGCAATTTTGCTCTTGA 975 0.4328 MDHIMEDLRSTTEEEQFELPGFRFHPTDEELVRFYLRRKLDKKPISIELIKQIDIYKYDPWDLPKASWTGGEKEWYFYCRRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSVAGEGISDCIIGLKKTLVYYRGSAGKGTKTEWMMHEFRLPSNINHPSHNPQEAEIWTLCRIFKRTVSQRKCTPDWAQMAAKRRCSDKMSRSMSNNNSAVDSCNSTITYDQESYINFGSGSPEQKPQLVHNYSTSNNNHHYNCDDNQRNHNFSRTSMAAQHHHHQQQHHQLTTSTSSPSSALSFWGNNQQASNNDLFAFENPWDELESVVQFCS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2283 324 MobiDBLite consensus disorder prediction 225 270 - -
Alju10g2283 324 MobiDBLite consensus disorder prediction 225 295 - -
Alju10g2283 324 ProSiteProfiles NAC domain profile. 18 175 IPR003441 GO:0003677|GO:0006355
Alju10g2283 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 289 - -
Alju10g2283 324 MobiDBLite consensus disorder prediction 279 295 - -
Alju10g2283 324 Gene3D NAC domain 27 179 IPR036093 GO:0003677|GO:0006355
Alju10g2283 324 Pfam No apical meristem (NAM) protein 20 150 IPR003441 GO:0003677|GO:0006355
Alju10g2283 324 SUPERFAMILY NAC domain 15 174 IPR036093 GO:0003677|GO:0006355
Alju10g2283 324 FunFam NAC domain-containing protein 35 27 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2283 Alju-ChrAlju10 44468319 44470333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2283 1 187 NAC Transcription Factor Family AT5G39820 53.081 4.13e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju10g2283 NAM 1.8e-35 No_clan