Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2282 ATGAAGGACGGTGGTAGAAAACATGGTGCACTGTCGCCATGCGCCGCGTGCAAGCTTCTCCGGCGAAGATGTGCTCAGGATTGCCTCTTTGCTCCTTACTTTCCGGCCGATGAACCCCACAAATTTGCAAGTGTTCACAAGGTTTTTGGTGCTAGCAATGTCAATAAAATGTTGCAGGAACTACCAGAGGAGCAAAGGAGTGACGCGGTGAGTTCAATGGTATATGAAGCAAACGCGAGGATGAGGGACCCAGTGTACGGATGTGTGGGGGCCATATCGTGTCTTCAGCAACAAGTTGATGTGCTTCAAACACAACTTGCTCTTGCCCAGGCAGAGCTTGTTCACATCAGAAATTCTTCTTCTTCATCAACCCAACCTCAATCCTCCTCTCATCATCATAACGATACCAAGTCGTCTTCTTTTTTCGCCGTCGACAATGTCACCGAAAGCTTGTGGTCTTGCTAG 465 0.486 MKDGGRKHGALSPCAACKLLRRRCAQDCLFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEEQRSDAVSSMVYEANARMRDPVYGCVGAISCLQQQVDVLQTQLALAQAELVHIRNSSSSSTQPQSSSHHHNDTKSSSFFAVDNVTESLWSC 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2282 154 MobiDBLite consensus disorder prediction 119 138 - -
Alju10g2282 154 Coils Coil 92 112 - -
Alju10g2282 154 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Alju10g2282 154 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Alju10g2282 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2282 Alju-ChrAlju10 44447758 44450808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2282 1 154 AS2 family AT1G31320 63.372 5.52e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju10g2282 LOB 8.1e-43 No_clan