Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2277 ATGGCTGGGTTTTTGCCTGGTGATGTCCCTTGTAATGGAACACATGGTTTCCACAGACAACCTGAGATGTCAGAGGATGGCCTTGGTTGGTATTTTACAAGGAAGGAGATTGAAGAAAATTCACCATCCAAACGAGATGGTATAGATTGGAAGAAAGAGACCTACTATCGCAAATCTTACTGCACATTCCTACAAGATTTAGGCATGAGACTTAAAGTACCTCAGGTAACCATTGCTACAGCAATAATTTTTTGTCATCGATTCTACCTTCGTCATTCCCTTGCAAGGAACGATAGGAGGATCATTGCAACAGTGTGCATGTTTCTCGCTGGGAAGGTTGAAGAAACTCCTCGCCCTTTGAAAGATGTAATTCTTGTCTCGTATGAAATCATAAACAAGAAGGACCCTGTAGCAGCTCAAAGAATCAAACAAAAGGAGGTATATGAACAGCAGAAAGAATTAATCTTAGCTGGAGAGAGGATTGTTCTTCAAACTCTTGGTTTCGATCTTAATCTGCACCATCCTTATAAACCTCTTGTTGAGGCTATTAAAAAATTTAAAGTTGCTCAAAATGCCCTTGCTCAAGTTGCGTGGAATTTTGTTAATGATGGACTTCGGACATGTCTTTGCCTGCAATTCCAGCCCCATCATATTGCAGCGGGAGCTATTTTCCTTGCTGCCAAGTTCCTTAAGGTGAAGCTCCCATCAGATGGGGAGAAGGTCTGGTGGCAAGAGTTTGATGTTACCCCTCGGCAATTGGAGGAAGTTAGTAATCAAATGTTGGAGCTATATGAACAAAACCGAGTGCCACCTTCAAATGACATTGAAGGTGCTCCAGGAAGTGGGGCCGCTAATTGGGCTGCTGCGAAGGTTCCTGCTAGCAATGATGAAAATGCAATCACAAACAGTAATTCTCTTACTGGAGCTACGAGTTCAAAACTTGAAACCTCAAAGCCCGGAGCTTCTAAGACAGTGTTCGAGTCATCTGCTAATAATGTTGGGCATCCAGTGCCGAACTACGGTAGAAGTACTGATTATGGGGGCACAGAAATGAAACCCAGTGTAGATGAAGCCAAGGGTAATCATCTTCTTGAGGGTGAAGCCCTGCCACACAAGGAAAACTTGCAGGGAGCTCAAGACAAGTCGAGGTCTCAATCAGGTTATGTAGAAGAGCAAGATAGCAATGTTGGGAGAAGTGAAATGAAGGAGGCTGCTGAGTTGAATGTTAAACATGCCAACAGAGATCCTGATCACAGAGATAGTACATTGGGGCGGCCACCTCAGGAAACTATCAAAAAAATTGACAGAGACAAGGTAAAGGCTGCGCTAGAGAAACGCAGGAAAGCATCTGGCCATATAACAAAGAAAACAGAGGTTATGGATGATGACGATCTGATTGAGAGGGAACTGGAGGATGGAATTGAACTGGCTGCTCAGAGTGAAAAGGACAAGCAGGATAGGAGGCAGAATTGGTCTAAGCCCACAGATAGATCAGATAATGGGAATATGCTGCATGGAAAGCGCCAAGATCATGTAGGCGAGCATCACGGGGTGAAGAGCCTGCCATCATCTGAACCTGATCTGAGTAACGTTGAAGAAGGGGAGGTATCGGCGCTTCATGACATTGGCCCTGGACTTCATTCACCCAAGTCAGGCGGCCGCAAGAGAAAAGCTGGGAGCTCACCTGACAGTGATTTGTAG 1701 0.448 MAGFLPGDVPCNGTHGFHRQPEMSEDGLGWYFTRKEIEENSPSKRDGIDWKKETYYRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFYLRHSLARNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIINKKDPVAAQRIKQKEVYEQQKELILAGERIVLQTLGFDLNLHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTCLCLQFQPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSNDIEGAPGSGAANWAAAKVPASNDENAITNSNSLTGATSSKLETSKPGASKTVFESSANNVGHPVPNYGRSTDYGGTEMKPSVDEAKGNHLLEGEALPHKENLQGAQDKSRSQSGYVEEQDSNVGRSEMKEAAELNVKHANRDPDHRDSTLGRPPQETIKKIDRDKVKAALEKRRKASGHITKKTEVMDDDDLIERELEDGIELAAQSEKDKQDRRQNWSKPTDRSDNGNMLHGKRQDHVGEHHGVKSLPSSEPDLSNVEEGEVSALHDIGPGLHSPKSGGRKRKAGSSPDSDL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2277 566 CDD CYCLIN_AcCycT_rpt1 46 169 - -
Alju10g2277 566 MobiDBLite consensus disorder prediction 379 393 - -
Alju10g2277 566 MobiDBLite consensus disorder prediction 395 463 - -
Alju10g2277 566 FunFam Cyclin-T1-5 like 172 276 - -
Alju10g2277 566 Gene3D - 21 170 - -
Alju10g2277 566 MobiDBLite consensus disorder prediction 471 521 - -
Alju10g2277 566 Pfam Cyclin, N-terminal domain 32 171 IPR006671 -
Alju10g2277 566 SUPERFAMILY Cyclin-like 29 171 IPR036915 -
Alju10g2277 566 FunFam Cyclin-T1-5 like 20 170 - -
Alju10g2277 566 CDD CYCLIN_AcCycT_rpt2 173 265 - -
Alju10g2277 566 MobiDBLite consensus disorder prediction 297 338 - -
Alju10g2277 566 MobiDBLite consensus disorder prediction 297 355 - -
Alju10g2277 566 SMART cyclin_7 177 262 IPR013763 -
Alju10g2277 566 SMART cyclin_7 62 164 IPR013763 -
Alju10g2277 566 MobiDBLite consensus disorder prediction 370 566 - -
Alju10g2277 566 Gene3D - 172 274 - -
Alju10g2277 566 PANTHER CYCLIN 30 322 IPR043198 GO:0006357|GO:0016538
Alju10g2277 566 SUPERFAMILY Cyclin-like 173 269 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2277 Alju-ChrAlju10 44378735 44389497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2277 52 179 Core Cell Cycle Gene Families AT5G27620 27.344 3.76e-06 47.0