Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2274 ATGGCTCCTTCTCCTTCTCCTTCACCACCAGTCATGGCTTTTGCAGTTGCTTCTGCCGTTTTTGTGTTCTTCAGCTGCTTGGTTTCTGTATCATCACAAGCTCAAAACGCCACCACAGATCCTTCTGAAGCGAGGGCTTTGAATTCAATCTTCAACAAATGGGGAATATTGGCACAAGCAAATGTGTGGAATATAAGCGGTGAACTTTGCAGCGGACGAGCCATTGACAGCACGACTACGATCGATGCTCCTGCCTTCAATCCATTTATCAAATGCGACTGTTCCAATGGCTCTTGCCATATTACTGCACTGAAGGTTTATGCAATGGATGTTGTTGGGGATATCCCAGAAGAGCTATGGACTCTGACTTACCTCACCAATTTGAACCTCGGCCAGAATGTCTTGACGGGCTCTCTGCCTCCAGCCATTGGAAATCTAACTAGCATGCAGTACATGACCTTAGGCATCAATTCCTTATCAGGGCAGCTTCCCAAGGAAATGGGAAATCTTACCGAGTTAAGATCATTGAGTGTTTCATCCAACAACTTTTCTGGTTCTATCCCATCTGAACTAGGGAAACTTGTGAAATTGGACCAACTCTATTTAGATAGTTCGGGACTTGGTGGCCAGATTCCTCCCACTTTTGCTAATCTTAAAAACCTGGCGAAACTATGGGCTTCAGACATGGAACTGACGGGCAGGATACCTGACTTCATAGGAAATTGGTCTAAGCTTATAGAGTTGAGGTTTCAGGGTAATTCTTTTGAAGGCCCAATACCATCATCATTTATCAATCTGACTTCTCTTACAGAGTTAAGAATAAGTGAAATATCTAATGGGAGCTCCTCACTGGAATTTATAAGGAATATGAAGTCTTTGACTGTCTTAGTACTGAGAAATAACAATATTTCTGATTCAATTCCATCCAATATCGGTGAATTTCTAAATTTGACCCAGCTGGATCTGAGCTTCAATAACATCACAGGACAGATTCCGGGATCACTTTTCAATCTGAGTTCACTAACACACTTGTTTCTTGGAAATAACAAACTCAGTGGTATAATCCCTACTCAGATAAGCCCAACTCTTCTCAATATAGACTTGTCCTACAACAATCTATCAGGGAGCCTCCCTTCTTGGGTAAACCAAGGAAATTTACAACTAAATTTGGTTGCCAACAACCTGACAATAGAAGCTTCAAATAGCAGTGGCCTTCCTTCTGGACTCAATTGTTTGCAGCAAAATTTTCCTTGTTTTCGTGGTGCTGGAATATATTATGACTTTGCAATCAAGTGTGGTGGTCTTTCAATTACATCAACAGAAAGAATTACTTATGAAAGAGATAATGAGACACTTGGTCCTGCAACTTATTTTGTTACGGATAAAACAAGATGGGCAGTTAGCAATGTTGGGTTATTTACTGGGTCACACGATGCGCTGTACACAAGTTTTGTATCCAACCAGTTCACTGGTACTGTGGACCCAGAGCTCTTCCAGACAGCAAGGCTATCGGCTTCTTCGTTAAGATATTATGGCTTGGGGCTGGAAAATGGGAATTATAACGTTTCCCTCTATTTCGCAGAAACATCTATTCCAGATACTACTACTACATGGAAAAGTCTTGGCAGACGGGTCTTTGATATATATATGCAGGGGAATCGTGTTTGGAAGGATTTTGACATAAAAAGGGAAGCTGGGGGTGCCTCTTTCAGAGCTGTCCGAAGGGATTTTCAGGTTAATGTGTCAGAAAACTTTCTTGAGATCCATTTCTTTTGGGCTGGAAAAGGGACTTGCTGTATTCCAGCTCAAGGTACTTATGGTCCTCTGATTTCAGCAATCAGCGCTACCCCAGATTTCATTCCCAAAGTCAGTAACAAACTTCCAGGCAGTTCAAAGAACAGAACCGGTTTGATTGTGGGAATTGTTGTTGGTGTTGGACTTGCAAGCTTTCTGTCTGTTTTTGTGGTTTTCTTCATCATCCAGAGAAGAAAGCGTCATGGAGATGATGAAGAAGAGCTTTTAGATATTGATACAAAGACATACACTTTCAGCTATTCTGAGTTAAAGAATGCTACAGGTGACTTCAATCCCGACAACAAACTGGGGGAGGGAGGTTTCGGACCTGTTTATAAGGGAACACTTAATGATGGAAGAGTAGTTGCTGTGAAACAATTATCTGTAGGATCTCATCAAGGAAAGAGCCAGTTCATAGCTGAGATTGCAACAATATCTGCTGTGCAACATCGCAATCTTGTTAAATTATATGGATGTTGCCTTGAAGGAAATAAAAGGCTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCTTTATTTGGAAATTGTTTAGCACTCAACTGGCCCACACGCTATGATATTTGCATGGGTGTGGCTAGAGGTTTAGCTTATCTTCATGAAGAGTCTCGGCTCCGTATTGTGCACCGTGATGTAAAGGCTAGTAATATTCTGCTTGATCATGAGCTTACCCCTAAAATATCTGATTTTGGTTTGGCCAAGTTATACGATGATAAAAAGACCCATATAAGCACCCGTGTGGCTGGGACAATTGGATATCTTGCTCCGGAGTATGCCATGCGTGGGCACCTTACAGAGAAAGCAGATGTGTTTTCCTTTGGCGTTTTGGCCTTAGAGATAGTTAGTGGGAGGCCAAATTCTGATTCAAGCCTGGAAGGAGAGAAGATGTATCTTCTAGAATGGGCTTGGCAACTGCATGAAAACAACTCTATACTTGAACTGGTAGATCCTAGACTATCAAAAGGTTTCAACGAGGAAGAAGTGAAAAGGATTGTAGGGATATCTCTTCTGTGCACTCAATCATCACCATCGTTAAGGCCGGCAATGTCCCGTGTGGTGGCGATGCTTTCTGGAGATATCGAAGTGAGCAGTGTAACTTCAAAGCCTGGATACTTGACAGACTGGAAATTTGATGATGTGAGCAGCTTCATGACTGGCTTGGCCACAAGGGGATCAGAGACAAGTCAATATAACTCATCCACAAGTACCAGCACTGTTAGTGTTGCAAACCATTCACCTGGAGATGCTTCTAAACCAATCCTTCGTCACATTATTAGTGAAGGTAGGTGA 3111 0.4208 MAPSPSPSPPVMAFAVASAVFVFFSCLVSVSSQAQNATTDPSEARALNSIFNKWGILAQANVWNISGELCSGRAIDSTTTIDAPAFNPFIKCDCSNGSCHITALKVYAMDVVGDIPEELWTLTYLTNLNLGQNVLTGSLPPAIGNLTSMQYMTLGINSLSGQLPKEMGNLTELRSLSVSSNNFSGSIPSELGKLVKLDQLYLDSSGLGGQIPPTFANLKNLAKLWASDMELTGRIPDFIGNWSKLIELRFQGNSFEGPIPSSFINLTSLTELRISEISNGSSSLEFIRNMKSLTVLVLRNNNISDSIPSNIGEFLNLTQLDLSFNNITGQIPGSLFNLSSLTHLFLGNNKLSGIIPTQISPTLLNIDLSYNNLSGSLPSWVNQGNLQLNLVANNLTIEASNSSGLPSGLNCLQQNFPCFRGAGIYYDFAIKCGGLSITSTERITYERDNETLGPATYFVTDKTRWAVSNVGLFTGSHDALYTSFVSNQFTGTVDPELFQTARLSASSLRYYGLGLENGNYNVSLYFAETSIPDTTTTWKSLGRRVFDIYMQGNRVWKDFDIKREAGGASFRAVRRDFQVNVSENFLEIHFFWAGKGTCCIPAQGTYGPLISAISATPDFIPKVSNKLPGSSKNRTGLIVGIVVGVGLASFLSVFVVFFIIQRRKRHGDDEEELLDIDTKTYTFSYSELKNATGDFNPDNKLGEGGFGPVYKGTLNDGRVVAVKQLSVGSHQGKSQFIAEIATISAVQHRNLVKLYGCCLEGNKRLLVYEYLENKSLDQALFGNCLALNWPTRYDICMGVARGLAYLHEESRLRIVHRDVKASNILLDHELTPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVLALEIVSGRPNSDSSLEGEKMYLLEWAWQLHENNSILELVDPRLSKGFNEEEVKRIVGISLLCTQSSPSLRPAMSRVVAMLSGDIEVSSVTSKPGYLTDWKFDDVSSFMTGLATRGSETSQYNSSTSTSTVSVANHSPGDASKPILRHIISEGR 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2274 1036 MobiDBLite consensus disorder prediction 998 1019 - -
Alju10g2274 1036 Gene3D Phosphorylase Kinase; domain 1 657 770 - -
Alju10g2274 1036 ProSiteProfiles Leucine-rich repeat profile. 316 338 IPR001611 GO:0005515
Alju10g2274 1036 Gene3D Ribonuclease Inhibitor 40 279 IPR032675 -
Alju10g2274 1036 Gene3D Transferase(Phosphotransferase) domain 1 771 975 - -
Alju10g2274 1036 SMART serkin_6 695 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2274 1036 CDD STKc_IRAK 701 963 - -
Alju10g2274 1036 FunFam Leucine-rich repeat transmembrane protein kinase 41 279 - -
Alju10g2274 1036 MobiDBLite consensus disorder prediction 998 1025 - -
Alju10g2274 1036 ProSiteProfiles Protein kinase domain profile. 695 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2274 1036 Gene3D - 426 617 - -
Alju10g2274 1036 SUPERFAMILY L domain-like 93 396 - -
Alju10g2274 1036 FunFam Leucine-rich repeat receptor-like protein kinase 425 617 - -
Alju10g2274 1036 Pfam Malectin domain 427 613 IPR021720 -
Alju10g2274 1036 SMART LRR_typ_2 290 314 IPR003591 -
Alju10g2274 1036 SMART LRR_typ_2 122 146 IPR003591 -
Alju10g2274 1036 SMART LRR_typ_2 170 194 IPR003591 -
Alju10g2274 1036 SMART LRR_typ_2 338 361 IPR003591 -
Alju10g2274 1036 Pfam Protein tyrosine and serine/threonine kinase 698 963 IPR001245 GO:0004672|GO:0006468
Alju10g2274 1036 Gene3D Ribonuclease Inhibitor 280 405 IPR032675 -
Alju10g2274 1036 FunFam Putative LRR receptor-like serine/threonine-protein kinase 280 403 - -
Alju10g2274 1036 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 24 997 - -
Alju10g2274 1036 FunFam Leucine-rich repeat receptor-like protein kinase 664 770 - -
Alju10g2274 1036 FunFam Putative LRR receptor-like serine/threonine-protein kinase 771 975 - -
Alju10g2274 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Alju10g2274 1036 SUPERFAMILY Protein kinase-like (PK-like) 678 984 IPR011009 -
Alju10g2274 1036 Pfam Leucine rich repeat 292 351 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2274 Alju-ChrAlju10 44351642 44364483 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2274 107 313 Receptor kinase-like Gene Family AT1G56120 29.187 7.47e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g2274 PK_Tyr_Ser-Thr 7e-48 CL0016