Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2272 ATGGCTTCTTATTCTTCACCAGTCATGGCTTTTGCAATTGCTTCTGCTGTTTCTGTGTTCTTCAGCTGCTTGGTTGGTGTTTCATCACAAGATCAAAACGTTACGGATCCTTCTGAAGCAAGAACTTTGAATTCAATCTTCAACAAATGGGGAAAATCGGCATCAGCAAATGACTGGAATATAAGCGGTGAACTATGCAGCGGACGAGCCATTGACAAGACTACCGAGATCGATGCCAGCGAATTCGATCCATTTATTAAATGCGAGTGTTCCAATGGCACTTGCCACATTACTAAACTGAAGGTCTATGCATTAGATGTTGTTGGGGCAATCCCAGAAGAGCTATGGACTCTGACTCACCTCACCAATTTGAACCTCGGCCAGAATTACTTGACGGGTTCTCTACCCCCAGCCATTGGAAATCTAACTCAAATGCAGTACATGACCTTTGGCATCAATTCCTTATCAGGGGAGCTTCCCAAGGAATTGGGAAATCTTGCCGAGTTAATAGTATTGAGTCTTGGAACCAACAACTTCTCTGGTTCTATCCCATCTGAGCTAGGGAAACTCGTGAAATTGGAACAACTCTATTTAGATAGTTCGGGACTTAGTGGCCAGATTCCTCCCGCTTTTGCTAATCTTAAAAACTTGGTGACAGTATGGGCTTCAGATATGGAACTCACGGGCAGGATACCTGAATTCATAGGAAATTGGTCTAAGCTTACAACCTTGAGGTTTCAGGGTAATTCTTTTGAAGGCCCAATACCATCATCATTGAGCAATCTCACTTCTCTTACAGAGTTGAGAATAAGTGAAATATCTAATGGGAGCTCCTCACTGGCATTTATAAGGAATATGAAGTCATTGACTGTCTTAATACTGAGAAATAACAATATTTCTGATTCAATTCCATCCAATATCGGTGAATTTCTAAATTTGACCCAGCTGGATCTGAGCTTCAATAAAATCACAGGACAGATTCCGGGATCACTTTTCAATCTGAGTTCACTAACACACTTGTTCCTGGGAAATAACAAACTCAGTGGTACTATCCCTGCTCAGTTAATCGAAAATCTTTCCAATATAGACTTGTCCTACAACAATCTATCAGGAAGCCTCCCCTCTTGGGTAAACCGACAAAATTTACAACTAAATTTGGTTGCTAACAATCTGACAATAGGAGGTTCAAGTAGCAGTGGCCTTCCTTCTGGACTCAATTGTTTGCAGCAAAATTTTCCTTGTTTCCGTGGTGCTGGAAAATATTATAACTTTTCAATCAAGTGTGGCGGTCCTTCAATTACATCAGCAGAAGGAATTACTTATGAAAGAGATAATGAGACACTTGGTCCTGCAACTTATTTTGTTACTGATACAACAAGATGGGCAGTTAGCAACGTCGGGTTATTTACTGGGTCAAACAATCCTGTGTACAAAAGTACTGTATCCAATCAGTTCACTGGTACTGTGGACTCAGGGCTCTTCCAGGCAGCAAGGCTAGACTCAGAGCTCTTCCTGACAGCAAGGCTATCAGCTTCTTCGTTAAGATATTATGGCCTGGGGCTGGAAAATGGGAATTATAACATTTCCCTCTATTTCGCAAAAACATCTATTGTAGATACGAATACTACTTGGAAAAGTCTTGGAAGACGGGTCTTTGATATATATATCCAGGGGAATCTTGTTTTGAAGGATTTTGACATAAAAAGGGAAACTGTGAGTGCCTTTTTTAGTGCTGTCCGAAAGGATTTTCAGGTTGATGTGTCAGAAAATTTTATTGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCAACTCAAGGTTCTTATGGTCCTCTGATTTCAGCAATTAGCGCTACCCCTGATTTCATTCCCACAGTCAGTAACAAACCTCCAGGCAGTGCAAAGAACAACACCGGTCTGATTGTGGGAATTGTTGTTGGTGTTGGAATCCCAAGTTTTCTGTCTTTTCTAGTGGTTTTCTGTATCATCCAGAGAAGAAAGCGTCATGGAGATGGTGAAGAAGAGCTTTTAGGTATTGATACAAAGCCATACACTTTCAACTATGCTGAGTTAAAGAAAGCTACAGATGACTTCAATCCTGGCAACAAACTGGGAGAGGGGGGTTTCGGACCTGTTTATAAGGGAACACTTAATGATGGAAGAGTAATTGCTGTGAAAACACTATCTGTTGGATCTGGTCAAGGAAAGAACCAGTTCATAGCTGAGATTGTAACTATATCTGTTGTACAACATCGCAACCTTGTTAAATTATACGGATGTTGCCTTGAAGGAAATAAAAGACTCCTTGTCTATGAGTATCTTGAAAACAAGAGTCTGGATCAAGCATTATTTGGAAATTGTTTAACTCTCAACTGGTCCGTACGCTATGATATCTGCATGGGTGTAGCTAGAGGTTTAGCTTATCTTCATGAAGAGTCTCAGCTTCGTATTGTGCACCGTGATGTAAAGGCTAGTAATATTCTGCTTGATCATAAGTTTACTCCTAAAATATCTGATTTTGGTTTGGCCAAGTTATATGATGATAAAAAGACCCATTTAAGCACCCGTGTGGCCGGGACATTTGGATATCTTGCTCCGGAGTATGCCATGCGTGGGCACCTCACAGAGAAAGCAGATGTGTTTTCCTTTGGCGTTTTAGCCCTAGAGATAGTTAGTGGGAGGCCAAATTCTGATTCAAGCCTTGAAGGGGAGAAGATATATCTTCTAGAATGGGCTTGGCAGCTGCATGAAAAGAACAGTACAGTTGATCTGATTGATCCAAGGCTGTCATCAGATTTCAATGAGGAAGAAGTTAAGAGAATTGTGGGGATAGCTCTTCTCTGCACTCAAACTTCACCATTGTCAAGACCAGCAACGTCCCGCGTTGTGGCAATGCTTGCTGGAGATATTGAAGTGAGCACTGTAACTTCAAGGCCTGGTTACTTGACCGACTGGAAGTTTGATGATGATGAGTACACCTTCACGACTGACTTGGCTACAAAGGGATCATATACGACTCAATATAACTCATCTGCAAACCAATCACCTGTAGATGCTTCTAAACCCATCCTTCGTCGCATTCTTAGTGAAGGTGGGTAA 3108 0.4151 MASYSSPVMAFAIASAVSVFFSCLVGVSSQDQNVTDPSEARTLNSIFNKWGKSASANDWNISGELCSGRAIDKTTEIDASEFDPFIKCECSNGTCHITKLKVYALDVVGAIPEELWTLTHLTNLNLGQNYLTGSLPPAIGNLTQMQYMTFGINSLSGELPKELGNLAELIVLSLGTNNFSGSIPSELGKLVKLEQLYLDSSGLSGQIPPAFANLKNLVTVWASDMELTGRIPEFIGNWSKLTTLRFQGNSFEGPIPSSLSNLTSLTELRISEISNGSSSLAFIRNMKSLTVLILRNNNISDSIPSNIGEFLNLTQLDLSFNKITGQIPGSLFNLSSLTHLFLGNNKLSGTIPAQLIENLSNIDLSYNNLSGSLPSWVNRQNLQLNLVANNLTIGGSSSSGLPSGLNCLQQNFPCFRGAGKYYNFSIKCGGPSITSAEGITYERDNETLGPATYFVTDTTRWAVSNVGLFTGSNNPVYKSTVSNQFTGTVDSGLFQAARLDSELFLTARLSASSLRYYGLGLENGNYNISLYFAKTSIVDTNTTWKSLGRRVFDIYIQGNLVLKDFDIKRETVSAFFSAVRKDFQVDVSENFIEIHLFWAGKGTCCIPTQGSYGPLISAISATPDFIPTVSNKPPGSAKNNTGLIVGIVVGVGIPSFLSFLVVFCIIQRRKRHGDGEEELLGIDTKPYTFNYAELKKATDDFNPGNKLGEGGFGPVYKGTLNDGRVIAVKTLSVGSGQGKNQFIAEIVTISVVQHRNLVKLYGCCLEGNKRLLVYEYLENKSLDQALFGNCLTLNWSVRYDICMGVARGLAYLHEESQLRIVHRDVKASNILLDHKFTPKISDFGLAKLYDDKKTHLSTRVAGTFGYLAPEYAMRGHLTEKADVFSFGVLALEIVSGRPNSDSSLEGEKIYLLEWAWQLHEKNSTVDLIDPRLSSDFNEEEVKRIVGIALLCTQTSPLSRPATSRVVAMLAGDIEVSTVTSRPGYLTDWKFDDDEYTFTTDLATKGSYTTQYNSSANQSPVDASKPILRRILSEGG 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2272 1035 FunFam Putative LRR receptor-like serine/threonine-protein kinase 276 399 - -
Alju10g2272 1035 Gene3D Phosphorylase Kinase; domain 1 664 776 - -
Alju10g2272 1035 Gene3D Transferase(Phosphotransferase) domain 1 777 980 - -
Alju10g2272 1035 Pfam Protein tyrosine and serine/threonine kinase 704 968 IPR001245 GO:0004672|GO:0006468
Alju10g2272 1035 FunFam Leucine-rich repeat receptor-like protein kinase 671 776 - -
Alju10g2272 1035 FunFam Leucine-rich repeat receptor-like protein kinase 421 623 - -
Alju10g2272 1035 FunFam Leucine-rich repeat transmembrane protein kinase 37 275 - -
Alju10g2272 1035 ProSiteProfiles Leucine-rich repeat profile. 312 334 IPR001611 GO:0005515
Alju10g2272 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672|GO:0006468
Alju10g2272 1035 Gene3D Ribonuclease Inhibitor 35 276 IPR032675 -
Alju10g2272 1035 SUPERFAMILY Protein kinase-like (PK-like) 684 999 IPR011009 -
Alju10g2272 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 24 1000 - -
Alju10g2272 1035 CDD STKc_IRAK 707 969 - -
Alju10g2272 1035 FunFam Putative LRR receptor-like serine/threonine-protein kinase 777 981 - -
Alju10g2272 1035 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Alju10g2272 1035 Gene3D - 420 623 - -
Alju10g2272 1035 Gene3D Ribonuclease Inhibitor 277 399 IPR032675 -
Alju10g2272 1035 SMART LRR_typ_2 286 310 IPR003591 -
Alju10g2272 1035 SMART LRR_typ_2 118 142 IPR003591 -
Alju10g2272 1035 SMART LRR_typ_2 334 358 IPR003591 -
Alju10g2272 1035 SMART LRR_typ_2 166 190 IPR003591 -
Alju10g2272 1035 SMART LRR_sd22_2 286 309 - -
Alju10g2272 1035 SMART LRR_sd22_2 310 325 - -
Alju10g2272 1035 SMART LRR_sd22_2 334 361 - -
Alju10g2272 1035 SMART LRR_sd22_2 118 144 - -
Alju10g2272 1035 SMART serkin_6 701 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2272 1035 SUPERFAMILY L domain-like 89 395 - -
Alju10g2272 1035 ProSiteProfiles Protein kinase domain profile. 701 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2272 1035 Pfam Malectin domain 423 619 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2272 Alju-ChrAlju10 44303653 44331039 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2272 102 275 Receptor kinase-like Gene Family AT1G56120 28.161 2.32e-11 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g2272 PK_Tyr_Ser-Thr 4.6e-45 CL0016